A0A0Y9W4B5: Secreted acid phosphatase, putative (GAP50)

Secreted acid phosphatase, putative (GAP50) is a 395-residue protein from Plasmodium berghei. This is its AlphaFold structure prediction, created 1 Jun 2022. UniProt accession: A0A0Y9W4B5.

Gene
GAP50
Organism
Plasmodium berghei
Length
395 residues
Mean pLDDT
87.3
Model
AF-A0A0Y9W4B5-F1 v6
Model created
1 Jun 2022
PDB structures
2

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Model confidence (pLDDT)

The mean pLDDT of this model is 87.3 (confident overall). pLDDT is AlphaFold's per-residue confidence score from 0 to 100. In MolViewer, choose the B-factor color scheme to color the model by pLDDT, because AlphaFold stores it in the B-factor column.

pLDDT bandMeaningShare of residues
Above 90Very high: backbone and side chains are usually accurate70%
70 to 90Confident: backbone generally right12%
50 to 70Low: treat with caution12%
Below 50Very low: often disordered regions6%

What pLDDT means and how to read it

Experimental structures in the PDB

Compare the prediction with experimentally determined structures of the same protein:

PDB IDMethodResolutionChains and residues
5WLGX-ray2.1 ÅC/H=40-48
5WLIX-ray2.2 ÅC/F/I/L=40-48

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