Ancestral Glucocorticoid Receptor2 is a 248-residue protein from unidentified. This is its AlphaFold structure prediction, created 1 Jun 2022. UniProt accession: A0A1X8XLE9.
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The mean pLDDT of this model is 95.6 (very high overall). pLDDT is AlphaFold's per-residue confidence score from 0 to 100. In MolViewer, choose the B-factor color scheme to color the model by pLDDT, because AlphaFold stores it in the B-factor column.
| pLDDT band | Meaning | Share of residues |
|---|---|---|
| Above 90 | Very high: backbone and side chains are usually accurate | 95% |
| 70 to 90 | Confident: backbone generally right | 4% |
| 50 to 70 | Low: treat with caution | 1% |
| Below 50 | Very low: often disordered regions | 0% |
What pLDDT means and how to read it
Compare the prediction with experimentally determined structures of the same protein:
| PDB ID | Method | Resolution | Chains and residues |
|---|---|---|---|
| 6W9L | X-ray | 1.45 Å | A=2-248 |
| 6W9M | X-ray | 1.59 Å | A=2-248 |
| 6W9K | X-ray | 1.6 Å | A=1-248 |
| 5UFS | X-ray | 2.12 Å | A/B=1-248 |
| 7YXC | X-ray | 2.25 Å | A=2-248 |
| 7YXD | X-ray | 2.3 Å | A/D/H/L=2-248 |
| 7YXN | X-ray | 2.46 Å | A/C=2-248 |
| 7YXR | X-ray | 2.5 Å | A/C=2-248 |
| 7YXO | X-ray | 2.99 Å | A/C/E=2-248 |
| 7YXP | X-ray | 3.36 Å | A=2-248 |
MolViewer loads the AlphaFold model straight from AlphaFold DB into your browser. Show it as a cartoon, color by pLDDT, measure distances and angles, and load a PDB structure next to it to compare.