Mitotic spindle organizing protein 1 (MZT1) is a 79-residue protein from Sus scrofa. This is its AlphaFold structure prediction, created 1 Jun 2022. UniProt accession: A0A287AS02.
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The mean pLDDT of this model is 90.7 (very high overall). pLDDT is AlphaFold's per-residue confidence score from 0 to 100. In MolViewer, choose the B-factor color scheme to color the model by pLDDT, because AlphaFold stores it in the B-factor column.
| pLDDT band | Meaning | Share of residues |
|---|---|---|
| Above 90 | Very high: backbone and side chains are usually accurate | 80% |
| 70 to 90 | Confident: backbone generally right | 9% |
| 50 to 70 | Low: treat with caution | 11% |
| Below 50 | Very low: often disordered regions | 0% |
What pLDDT means and how to read it
Cytoplasm, cytoskeleton, microtubule organizing center
Compare the prediction with experimentally determined structures of the same protein:
| PDB ID | Method | Resolution | Chains and residues |
|---|---|---|---|
| 9G3Z | EM | 4.3 Å | O/P/Q=1-79 |
| 9G3X | EM | 4.5 Å | P/R=1-79 |
| 9G3Y | EM | 6.8 Å | O/P/Q=1-79 |
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