Small ribosomal subunit protein eS1 (LOC542931) is a 263-residue protein from Triticum aestivum. This is its AlphaFold structure prediction, created 1 Jun 2022. UniProt accession: A0A3B6IU74.
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The mean pLDDT of this model is 83.8 (confident overall). pLDDT is AlphaFold's per-residue confidence score from 0 to 100. In MolViewer, choose the B-factor color scheme to color the model by pLDDT, because AlphaFold stores it in the B-factor column.
| pLDDT band | Meaning | Share of residues |
|---|---|---|
| Above 90 | Very high: backbone and side chains are usually accurate | 65% |
| 70 to 90 | Confident: backbone generally right | 16% |
| 50 to 70 | Low: treat with caution | 5% |
| Below 50 | Very low: often disordered regions | 14% |
What pLDDT means and how to read it
Component of the small ribosomal subunit. Mature ribosomes consist of a small (40S) and a large (60S) subunit. The 40S subunit contains about 33 different proteins and 1 molecule of RNA (18S). The 60S subunit contains about 49 different proteins and 3 molecules of RNA (25S, 5.8S and 5S)
Cytoplasm
Compare the prediction with experimentally determined structures of the same protein:
| PDB ID | Method | Resolution | Chains and residues |
|---|---|---|---|
| 8R6F | EM | 2.34 Å | B=1-263 |
| 8JIW | EM | 2.88 Å | BB=1-263 |
| 8IP8 | EM | 2.9 Å | bb=1-263 |
| 8IP9 | EM | 3.0 Å | bb=1-263 |
| 8IPA | EM | 3.4 Å | bb=1-263 |
| 8IPB | EM | 3.4 Å | bb=1-263 |
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