Large ribosomal subunit protein uL2 (ZNF34) is a 233-residue protein from Oryctolagus cuniculus. This is its AlphaFold structure prediction, created 1 Jun 2022. UniProt accession: A0A5F9D5B2.
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The mean pLDDT of this model is 92.4 (very high overall). pLDDT is AlphaFold's per-residue confidence score from 0 to 100. In MolViewer, choose the B-factor color scheme to color the model by pLDDT, because AlphaFold stores it in the B-factor column.
| pLDDT band | Meaning | Share of residues |
|---|---|---|
| Above 90 | Very high: backbone and side chains are usually accurate | 85% |
| 70 to 90 | Confident: backbone generally right | 11% |
| 50 to 70 | Low: treat with caution | 2% |
| Below 50 | Very low: often disordered regions | 2% |
What pLDDT means and how to read it
Component of the large ribosomal subunit. Interacts with CRY1
Compare the prediction with experimentally determined structures of the same protein:
| PDB ID | Method | Resolution | Chains and residues |
|---|---|---|---|
| 7OBR | EM | 2.8 Å | A=1-221 |
| 7QWR | EM | 2.9 Å | A=1-221 |
| 7QWS | EM | 3.4 Å | A=1-221 |
| 8BTK | EM | 3.5 Å | BA=1-46, BA=182-233 |
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