A0A8D1V2H0: Gamma-tubulin complex component (TUBGCP4)

Gamma-tubulin complex component (TUBGCP4) is a 667-residue protein from Sus scrofa. This is its AlphaFold structure prediction, created 31 Mar 2025. UniProt accession: A0A8D1V2H0.

Gene
TUBGCP4
Organism
Sus scrofa
Length
667 residues
Mean pLDDT
79.3
Model
AF-A0A8D1V2H0-F1 v6
Model created
31 Mar 2025
PDB structures
3

Explore in 3D Color by confidence AlphaFold DB UniProt

Model confidence (pLDDT)

The mean pLDDT of this model is 79.3 (confident overall). pLDDT is AlphaFold's per-residue confidence score from 0 to 100. In MolViewer, choose the B-factor color scheme to color the model by pLDDT, because AlphaFold stores it in the B-factor column.

pLDDT bandMeaningShare of residues
Above 90Very high: backbone and side chains are usually accurate41%
70 to 90Confident: backbone generally right37%
50 to 70Low: treat with caution8%
Below 50Very low: often disordered regions14%

What pLDDT means and how to read it

Function

Component of the gamma-tubulin ring complex (gTuRC) which mediates microtubule nucleation. The gTuRC regulates the minus-end nucleation of alpha-beta tubulin heterodimers that grow into microtubule protafilaments, a critical step in centrosome duplication and spindle formation

Subunit structure

Component of the gamma-tubulin ring complex (gTuRC) consisting of TUBGCP2, TUBGCP3, TUBGCP4, TUBGCP5 and TUBGCP6 and gamma-tubulin TUBG1 or TUBG2. TUBGCP2, TUBGCP3, TUBGCP4, TUBGCP5 and TUBGCP6 assemble in a 5:5:2:1:1 stoichiometry; each is associated with a gamma-tubulin, thereby arranging 14 gamma-tubulins in a helical manner. Gamma-tubulin at the first position is blocked by TUBGCP3 at the…

Subcellular location

Cytoplasm, cytoskeleton, microtubule organizing center, centrosome

Experimental structures in the PDB

Compare the prediction with experimentally determined structures of the same protein:

PDB IDMethodResolutionChains and residues
9G3ZEM4.3 ÅI/K=1-667
9G3XEM4.5 ÅI=1-667
9G3YEM6.8 ÅI/K=1-667

More AlphaFold highlights

About this viewer

MolViewer loads the AlphaFold model straight from AlphaFold DB into your browser. Show it as a cartoon, color by pLDDT, measure distances and angles, and load a PDB structure next to it to compare.