Kumopsin1 (HaRh1) is a 372-residue protein from Hasarius adansoni. This is its AlphaFold structure prediction, created 1 Jun 2022. UniProt accession: B1B1U5.
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The mean pLDDT of this model is 87.9 (confident overall). pLDDT is AlphaFold's per-residue confidence score from 0 to 100. In MolViewer, choose the B-factor color scheme to color the model by pLDDT, because AlphaFold stores it in the B-factor column.
| pLDDT band | Meaning | Share of residues |
|---|---|---|
| Above 90 | Very high: backbone and side chains are usually accurate | 73% |
| 70 to 90 | Confident: backbone generally right | 14% |
| 50 to 70 | Low: treat with caution | 4% |
| Below 50 | Very low: often disordered regions | 9% |
What pLDDT means and how to read it
Membrane
Compare the prediction with experimentally determined structures of the same protein:
| PDB ID | Method | Resolution | Chains and residues |
|---|---|---|---|
| 6I9K | X-ray | 2.15 Å | A=1-372 |
| 9EPP | EM | 4.06 Å | R=20-346 |
| 9EPQ | EM | 4.15 Å | R=20-346 |
| 9EPR | EM | 4.9 Å | R=1-372 |
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