F8W3J5: Toll-like receptor 5b (tlr5b)

Toll-like receptor 5b (tlr5b) is a 881-residue protein from Danio rerio. This is its AlphaFold structure prediction, created 1 Aug 2025. UniProt accession: F8W3J5.

Gene
tlr5b
Organism
Danio rerio
Length
881 residues
Mean pLDDT
88.4
Model
AF-F8W3J5-F1 v6
Model created
1 Aug 2025
PDB structures
2

Explore in 3D Color by confidence AlphaFold DB UniProt

Model confidence (pLDDT)

The mean pLDDT of this model is 88.4 (confident overall). pLDDT is AlphaFold's per-residue confidence score from 0 to 100. In MolViewer, choose the B-factor color scheme to color the model by pLDDT, because AlphaFold stores it in the B-factor column.

pLDDT bandMeaningShare of residues
Above 90Very high: backbone and side chains are usually accurate69%
70 to 90Confident: backbone generally right20%
50 to 70Low: treat with caution6%
Below 50Very low: often disordered regions5%

What pLDDT means and how to read it

Subcellular location

Membrane

Experimental structures in the PDB

Compare the prediction with experimentally determined structures of the same protein:

PDB IDMethodResolutionChains and residues
6BXAX-ray2.3 ÅA/B=28-396
6BXCX-ray2.5 ÅA/B=28-396

More AlphaFold highlights

About this viewer

MolViewer loads the AlphaFold model straight from AlphaFold DB into your browser. Show it as a cartoon, color by pLDDT, measure distances and angles, and load a PDB structure next to it to compare.