P0DP01: Immunoglobulin heavy variable 1-8 (IGHV1-8)

Immunoglobulin heavy variable 1-8 (IGHV1-8) is a 117-residue protein from Homo sapiens. This is its AlphaFold structure prediction, created 1 Aug 2025. UniProt accession: P0DP01.

Gene
IGHV1-8
Organism
Homo sapiens
Length
117 residues
Mean pLDDT
91.9
Model
AF-P0DP01-F1 v6
Model created
1 Aug 2025
PDB structures
2

Explore in 3D Color by confidence AlphaFold DB UniProt

Model confidence (pLDDT)

The mean pLDDT of this model is 91.9 (very high overall). pLDDT is AlphaFold's per-residue confidence score from 0 to 100. In MolViewer, choose the B-factor color scheme to color the model by pLDDT, because AlphaFold stores it in the B-factor column.

pLDDT bandMeaningShare of residues
Above 90Very high: backbone and side chains are usually accurate84%
70 to 90Confident: backbone generally right3%
50 to 70Low: treat with caution13%
Below 50Very low: often disordered regions1%

What pLDDT means and how to read it

Function

V region of the variable domain of immunoglobulin heavy chains that participates in the antigen recognition (PubMed:24600447). Immunoglobulins, also known as antibodies, are membrane-bound or secreted glycoproteins produced by B lymphocytes. In the recognition phase of humoral immunity, the membrane-bound immunoglobulins serve as receptors which, upon binding of a specific antigen, trigger the clonal expansion and differentiation of B lymphocytes into immunoglobulins-secreting plasma cells. Secreted immunoglobulins mediate the effector phase of humoral immunity, which results in the elimination of bound antigens (PubMed:20176268, PubMed:22158414). The antigen binding site is formed by the…

Subunit structure

Immunoglobulins are composed of two identical heavy chains and two identical light chains; disulfide-linked

Subcellular location

Secreted, Cell membrane

Experimental structures in the PDB

Compare the prediction with experimentally determined structures of the same protein:

PDB IDMethodResolutionChains and residues
7CZZEM3.2 ÅH/I/J=20-117
7CZYEM3.3 ÅH/J=20-117

More AlphaFold highlights

About this viewer

MolViewer loads the AlphaFold model straight from AlphaFold DB into your browser. Show it as a cartoon, color by pLDDT, measure distances and angles, and load a PDB structure next to it to compare.