P13208: Sarafotoxin

Sarafotoxin is a 543-residue protein from Atractaspis engaddensis. This is its AlphaFold structure prediction, created 1 Aug 2025. UniProt accession: P13208.

Organism
Atractaspis engaddensis
Length
543 residues
Mean pLDDT
53.8
Model
AF-P13208-F1 v6
Model created
1 Aug 2025
PDB structures
2

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Model confidence (pLDDT)

The mean pLDDT of this model is 53.8 (low overall). pLDDT is AlphaFold's per-residue confidence score from 0 to 100. In MolViewer, choose the B-factor color scheme to color the model by pLDDT, because AlphaFold stores it in the B-factor column.

pLDDT bandMeaningShare of residues
Above 90Very high: backbone and side chains are usually accurate0%
70 to 90Confident: backbone generally right3%
50 to 70Low: treat with caution63%
Below 50Very low: often disordered regions34%

What pLDDT means and how to read it

Function

Vasoconstrictor activity. These toxins cause cardiac arrest probably as a result of coronary vasospasm

Subcellular location

Secreted

Experimental structures in the PDB

Compare the prediction with experimentally determined structures of the same protein:

PDB IDMethodResolutionChains and residues
6LRYX-ray3.0 ÅB=430-450
1SRBNMRA=430-450

More AlphaFold highlights

About this viewer

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