Small ribosomal subunit protein uS5 (rpsE) is a 166-residue protein from Bacillus subtilis (strain 168). This is its AlphaFold structure prediction, created 1 Aug 2025. UniProt accession: P21467.
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The mean pLDDT of this model is 93.0 (very high overall). pLDDT is AlphaFold's per-residue confidence score from 0 to 100. In MolViewer, choose the B-factor color scheme to color the model by pLDDT, because AlphaFold stores it in the B-factor column.
| pLDDT band | Meaning | Share of residues |
|---|---|---|
| Above 90 | Very high: backbone and side chains are usually accurate | 87% |
| 70 to 90 | Confident: backbone generally right | 11% |
| 50 to 70 | Low: treat with caution | 2% |
| Below 50 | Very low: often disordered regions | 0% |
What pLDDT means and how to read it
Component of the small ribosomal subunit. The ribosome is a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell
Part of the 30S ribosomal subunit (PubMed:30126986). Contacts proteins uS4 and uS8 (By similarity)
Compare the prediction with experimentally determined structures of the same protein:
| PDB ID | Method | Resolution | Chains and residues |
|---|---|---|---|
| 8QCQ | EM | 2.3 Å | e=1-166 |
| 9FY1 | EM | 2.3 Å | e=1-166 |
| 9FY2 | EM | 2.3 Å | e=1-166 |
| 9FY3 | EM | 2.8 Å | e=1-166 |
| 8BUU | EM | 2.9 Å | e=1-166 |
| 6HA1 | EM | 3.1 Å | e=1-166 |
| 8CDU | EM | 3.1 Å | G=1-166 |
| 7O5B | EM | 3.33 Å | E=1-166 |
| 8QPP | EM | 3.4 Å | E=1-166 |
| 6HA8 | EM | 3.5 Å | e=1-166 |
| 7QV1 | EM | 3.5 Å | e=1-166 |
| 7QV2 | EM | 3.5 Å | e=1-166 |
| 8CEC | EM | 3.57 Å | G=1-166 |
| 8R55 | EM | 3.57 Å | E=1-166 |
| 8CEE | EM | 3.7 Å | G=1-166 |
| 5NJT | EM | 3.8 Å | E=2-166 |
| 3J9W | EM | 3.9 Å | AE=1-166 |
| 8CED | EM | 4.15 Å | G=1-166 |
| 6HTQ | EM | 4.5 Å | e=3-166 |
| 8CDV | EM | 4.73 Å | G=1-166 |
Showing 20 of 23 experimental structures (best resolution first).
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