Lymphocyte-specific protein 1 (LSP1) is a 339-residue protein from Homo sapiens. This is its AlphaFold structure prediction, created 1 Aug 2025. UniProt accession: P33241.
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The mean pLDDT of this model is 59.5 (low overall). pLDDT is AlphaFold's per-residue confidence score from 0 to 100. In MolViewer, choose the B-factor color scheme to color the model by pLDDT, because AlphaFold stores it in the B-factor column.
| pLDDT band | Meaning | Share of residues |
|---|---|---|
| Above 90 | Very high: backbone and side chains are usually accurate | 9% |
| 70 to 90 | Confident: backbone generally right | 13% |
| 50 to 70 | Low: treat with caution | 44% |
| Below 50 | Very low: often disordered regions | 35% |
What pLDDT means and how to read it
May play a role in mediating neutrophil activation and chemotaxis
Binds actin
Cell membrane
Compare the prediction with experimentally determined structures of the same protein:
| PDB ID | Method | Resolution | Chains and residues |
|---|---|---|---|
| 3BH8 | X-ray | 1.65 Å | C=249-258 |
| 4NO2 | X-ray | 2.0 Å | C=249-260 |
| 4NO0 | X-ray | 2.7 Å | C=249-260 |
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