P39984: Histone acetyltransferase type B subunit 2 (HAT2)

Histone acetyltransferase type B subunit 2 (HAT2) is a 401-residue protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c). This is its AlphaFold structure prediction, created 1 Aug 2025. UniProt accession: P39984.

Gene
HAT2
Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Length
401 residues
Mean pLDDT
91.3
Model
AF-P39984-F1 v6
Model created
1 Aug 2025
PDB structures
3

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Model confidence (pLDDT)

The mean pLDDT of this model is 91.3 (very high overall). pLDDT is AlphaFold's per-residue confidence score from 0 to 100. In MolViewer, choose the B-factor color scheme to color the model by pLDDT, because AlphaFold stores it in the B-factor column.

pLDDT bandMeaningShare of residues
Above 90Very high: backbone and side chains are usually accurate84%
70 to 90Confident: backbone generally right7%
50 to 70Low: treat with caution3%
Below 50Very low: often disordered regions7%

What pLDDT means and how to read it

Function

Regulatory subunit of the histone acetylase B (HAT-B) complex. The complex acetylates 'Lys-12' of histone H4 which is required for telomeric silencing. HAT2 is required for high affinity binding of the acetyltransferase to histone H4, for the nuclear location of HAT1 and for the HAT1-HIF1 interaction. Alone, it is unable to bind to H4, requiring HAT1 for high affinity interaction with the histone tail. HAT2 also has a HAT1 independent function in life-span regulation

Subunit structure

Component of the HAT-B complex composed of at least HAT1 and HAT2. In the cytoplasm, this complex binds to the histone H4 tail. In the nucleus, the HAT-B complex has an additional component, the histone H3/H4 chaperone HIF1

Subcellular location

Cytoplasm, Nucleus

Experimental structures in the PDB

Compare the prediction with experimentally determined structures of the same protein:

PDB IDMethodResolutionChains and residues
4PSWX-ray2.1 ÅB=7-390
4PSXX-ray2.51 ÅB/E=8-389
7XAYX-ray3.3 ÅB=1-401

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