60S ribosomal subunit assembly/export protein LOC1 (LOC1) is a 204-residue protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c). This is its AlphaFold structure prediction, created 1 Aug 2025. UniProt accession: P43586.
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The mean pLDDT of this model is 81.6 (confident overall). pLDDT is AlphaFold's per-residue confidence score from 0 to 100. In MolViewer, choose the B-factor color scheme to color the model by pLDDT, because AlphaFold stores it in the B-factor column.
| pLDDT band | Meaning | Share of residues |
|---|---|---|
| Above 90 | Very high: backbone and side chains are usually accurate | 28% |
| 70 to 90 | Confident: backbone generally right | 56% |
| 50 to 70 | Low: treat with caution | 15% |
| Below 50 | Very low: often disordered regions | 1% |
What pLDDT means and how to read it
Required for efficient assembly and nuclear export of the 60S ribosomal subunit. Involved in asymmetric localization of ASH1 mRNA
Component of the 66S pre-ribosomal particle. Interacts with NOP7, RRP1, RRP15 and SHE2
Nucleus, nucleolus
Compare the prediction with experimentally determined structures of the same protein:
| PDB ID | Method | Resolution | Chains and residues |
|---|---|---|---|
| 8V83 | EM | 2.53 Å | 7=1-204 |
| 8V87 | EM | 2.66 Å | 7=1-204 |
| 8V84 | EM | 2.7 Å | 7=1-204 |
| 7NAC | EM | 3.04 Å | 7=1-204 |
| 7R7A | EM | 3.04 Å | 7=1-204 |
| 7R6K | EM | 3.17 Å | 7=1-204 |
| 7R7C | EM | 3.71 Å | 7=1-204 |
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