P9WGJ9: Transcriptional regulatory protein EmbR (embR)

Transcriptional regulatory protein EmbR (embR) is a 388-residue protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv). This is its AlphaFold structure prediction, created 1 Aug 2025. UniProt accession: P9WGJ9.

Gene
embR
Organism
Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Length
388 residues
Mean pLDDT
92.1
Model
AF-P9WGJ9-F1 v6
Model created
1 Aug 2025
PDB structures
2

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Model confidence (pLDDT)

The mean pLDDT of this model is 92.1 (very high overall). pLDDT is AlphaFold's per-residue confidence score from 0 to 100. In MolViewer, choose the B-factor color scheme to color the model by pLDDT, because AlphaFold stores it in the B-factor column.

pLDDT bandMeaningShare of residues
Above 90Very high: backbone and side chains are usually accurate88%
70 to 90Confident: backbone generally right6%
50 to 70Low: treat with caution2%
Below 50Very low: often disordered regions4%

What pLDDT means and how to read it

Function

Positively regulates the transcription of the embCAB operon. Exhibits ATPase and GTPase activities

Subunit structure

Interacts with RNA polymerase (PubMed:16817899). Co-immunoprecipitates with DarG in the presence and absence of darT (PubMed:32634279)

Experimental structures in the PDB

Compare the prediction with experimentally determined structures of the same protein:

PDB IDMethodResolutionChains and residues
2FF4X-ray1.9 ÅA/B=1-388
2FEZX-ray2.0 ÅA=1-388

More AlphaFold highlights

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