Q12389: ATP-dependent RNA helicase DBP10 (DBP10)

ATP-dependent RNA helicase DBP10 (DBP10) is a 995-residue protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c). This is its AlphaFold structure prediction, created 1 Aug 2025. UniProt accession: Q12389.

Gene
DBP10
Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Length
995 residues
Mean pLDDT
69.3
Model
AF-Q12389-F1 v6
Model created
1 Aug 2025
PDB structures
3

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Model confidence (pLDDT)

The mean pLDDT of this model is 69.3 (low overall). pLDDT is AlphaFold's per-residue confidence score from 0 to 100. In MolViewer, choose the B-factor color scheme to color the model by pLDDT, because AlphaFold stores it in the B-factor column.

pLDDT bandMeaningShare of residues
Above 90Very high: backbone and side chains are usually accurate15%
70 to 90Confident: backbone generally right44%
50 to 70Low: treat with caution16%
Below 50Very low: often disordered regions25%

What pLDDT means and how to read it

Function

ATP-binding RNA helicase involved in the biogenesis of 60S ribosomal subunits and is required for the normal formation of 25S and 5.8S rRNAs

Subunit structure

Interacts with RRP1 and associates with pre-ribosomal particles

Subcellular location

Nucleus, nucleolus

Experimental structures in the PDB

Compare the prediction with experimentally determined structures of the same protein:

PDB IDMethodResolutionChains and residues
8V87EM2.66 Å3=1-995
8V84EM2.7 Å3=1-995
8V85EM2.9 Å3=1-995

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About this viewer

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