Ig-like domain-containing protein is a 236-residue protein from Homo sapiens. This is its AlphaFold structure prediction, created 1 Jun 2022. UniProt accession: Q7Z3Y4.
Explore in 3D Color by confidence AlphaFold DB UniProt
The mean pLDDT of this model is 92.4 (very high overall). pLDDT is AlphaFold's per-residue confidence score from 0 to 100. In MolViewer, choose the B-factor color scheme to color the model by pLDDT, because AlphaFold stores it in the B-factor column.
| pLDDT band | Meaning | Share of residues |
|---|---|---|
| Above 90 | Very high: backbone and side chains are usually accurate | 88% |
| 70 to 90 | Confident: backbone generally right | 3% |
| 50 to 70 | Low: treat with caution | 4% |
| Below 50 | Very low: often disordered regions | 5% |
What pLDDT means and how to read it
Cell membrane, Secreted
Compare the prediction with experimentally determined structures of the same protein:
| PDB ID | Method | Resolution | Chains and residues |
|---|---|---|---|
| 5VSI | X-ray | 1.51 Å | L=23-235 |
| 6MY4 | X-ray | 1.69 Å | B/L=23-236 |
| 6MY5 | X-ray | 1.73 Å | B/L=23-236 |
| 4PUB | X-ray | 1.75 Å | L=23-236 |
| 1L7I | X-ray | 1.8 Å | L=23-236 |
| 6MXS | X-ray | 1.95 Å | B/L=23-236 |
| 6MXR | X-ray | 2.04 Å | B/L=23-236 |
| 4OGY | X-ray | 2.1 Å | L/N=23-236 |
| 5VR9 | X-ray | 2.15 Å | B/L=23-235 |
| 9MY8 | EM | 2.3 Å | L=23-236 |
| 4OGX | X-ray | 2.4 Å | L=23-236 |
| 1PG7 | X-ray | 2.5 Å | L/M=23-235 |
| 1AXS | X-ray | 2.6 Å | A/L=23-233 |
| 6BGT | X-ray | 2.7 Å | A=23-236 |
| 7ZLG | EM | 2.72 Å | L=23-236 |
| 6MH2 | X-ray | 2.8 Å | A/C=23-236 |
| 7ZLI | EM | 2.99 Å | L=23-236 |
| 9BDG | EM | 3.01 Å | G/H/I=23-236 |
| 2JIX | X-ray | 3.2 Å | A/G/L=23-236 |
| 1S78 | X-ray | 3.25 Å | C/E=23-236 |
Showing 20 of 23 experimental structures (best resolution first).
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