Regulatory-associated protein of TOR 1 (RAPTOR1) is a 1344-residue protein from Arabidopsis thaliana. This is its AlphaFold structure prediction, created 1 Aug 2025. UniProt accession: Q93YQ1.
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The mean pLDDT of this model is 79.4 (confident overall). pLDDT is AlphaFold's per-residue confidence score from 0 to 100. In MolViewer, choose the B-factor color scheme to color the model by pLDDT, because AlphaFold stores it in the B-factor column.
| pLDDT band | Meaning | Share of residues |
|---|---|---|
| Above 90 | Very high: backbone and side chains are usually accurate | 60% |
| 70 to 90 | Confident: backbone generally right | 15% |
| 50 to 70 | Low: treat with caution | 4% |
| Below 50 | Very low: often disordered regions | 20% |
What pLDDT means and how to read it
Probable component of the plant TOR kinase pathway that recruits substrates for TOR (PubMed:16377759, PubMed:29236692). Modulates plant cell growth and regulates the activity of ATPK1 kinase in response to osmotic stress (PubMed:16377759)
Interacts with TOR, ATPK1 and ML1. Interacts with KIN10 (PubMed:27545962)
Cytoplasm
Compare the prediction with experimentally determined structures of the same protein:
| PDB ID | Method | Resolution | Chains and residues |
|---|---|---|---|
| 5WBI | X-ray | 3.0 Å | A=1-1344 |
| 5WBJ | X-ray | 3.0 Å | A=1-1344 |
| 5WBK | X-ray | 3.11 Å | A=1-1344 |
| 5WBL | X-ray | 3.35 Å | A=1-1344 |
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