S4RAZ3: H3.4 histone

H3.4 histone is a 159-residue protein from Petromyzon marinus. This is its AlphaFold structure prediction, created 1 Jun 2022. UniProt accession: S4RAZ3.

Organism
Petromyzon marinus
Length
159 residues
Mean pLDDT
80.4
Model
AF-S4RAZ3-F1 v6
Model created
1 Jun 2022
PDB structures
2

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Model confidence (pLDDT)

The mean pLDDT of this model is 80.4 (confident overall). pLDDT is AlphaFold's per-residue confidence score from 0 to 100. In MolViewer, choose the B-factor color scheme to color the model by pLDDT, because AlphaFold stores it in the B-factor column.

pLDDT bandMeaningShare of residues
Above 90Very high: backbone and side chains are usually accurate59%
70 to 90Confident: backbone generally right4%
50 to 70Low: treat with caution24%
Below 50Very low: often disordered regions13%

What pLDDT means and how to read it

Subcellular location

Chromosome, Nucleus

Experimental structures in the PDB

Compare the prediction with experimentally determined structures of the same protein:

PDB IDMethodResolutionChains and residues
9SI9EM2.86 ÅE=25-159
6FTXEM4.5 ÅA=62-158

More AlphaFold highlights

About this viewer

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