Agmatine 3D structure

Agmatine (also called 1-Amino-4-guanidobutane, 1-Amino-4-guanidinobutane) has the formula C5H14N4 and a molar mass of 130.19 g/mol. The model above is PubChem's computed 3D conformer: drag to rotate, scroll to zoom, and use the measurement tools to read bond lengths and angles.

Formula
C5H14N4
Molar mass
130.19 g/mol
PubChem CID
199
Heavy atoms
9
Category
Neurotransmitters

Explore in 3D Space-filling model PubChem

Identifiers

IUPAC name2-(4-aminobutyl)guanidine
SMILESC(CCN=C(N)N)CN
PubChem CID199
Other names1-Amino-4-guanidobutane, 1-Amino-4-guanidinobutane, Argmatine, N-4-Aminobutylguanidine, 4-Guanidino-1-butanamine

How to read the 3D model

Atoms use the standard CPK colors: carbon gray, hydrogen white, oxygen red, nitrogen blue, sulfur yellow. Switch to Spacefill to see the molecule's overall shape and size, or Stick for a clear view of the bonds. Click two atoms in distance mode to measure a bond length in ångströms.

3D coordinates are PubChem's computed conformer, one low-energy shape of the molecule. Flexible molecules can take many other shapes.

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