Pseudouridine 3D structure

Pseudouridine (also called psi-Uridine, beta-Pseudouridine) has the formula C9H12N2O6 and a molar mass of 244.20 g/mol. The model above is PubChem's computed 3D conformer: drag to rotate, scroll to zoom, and use the measurement tools to read bond lengths and angles.

Formula
C9H12N2O6
Molar mass
244.20 g/mol
PubChem CID
15047
Heavy atoms
17
Category
Nucleotides and nucleobases

Explore in 3D Space-filling model PubChem

Identifiers

IUPAC name5-[(2S,3R,4S,5R)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]-1H-pyrimidine-2,4-dione
SMILESC1=C(C(=O)NC(=O)N1)[C@H]2[C@@H]([C@@H]([C@H](O2)CO)O)O
PubChem CID15047
Other namespsi-Uridine, beta-Pseudouridine, 5-Ribosyluracil, Pseudouridine C, beta-D-Pseudouridine

How to read the 3D model

Atoms use the standard CPK colors: carbon gray, hydrogen white, oxygen red, nitrogen blue, sulfur yellow. Switch to Spacefill to see the molecule's overall shape and size, or Stick for a clear view of the bonds. Click two atoms in distance mode to measure a bond length in ångströms.

3D coordinates are PubChem's computed conformer, one low-energy shape of the molecule. Flexible molecules can take many other shapes.

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