10SB: PCSK9

PCSK9 in complex with cyclic peptide 21. Determined by X-ray diffraction at 1.83 Å resolution. Released 3 Jun 2026.

Method
X-ray diffraction
Resolution
1.83 Å
Organisms
Homo sapiens, synthetic construct
Chains
3
Atoms
3,192
Mol. weight
48.17 kDa
Ligands
A1C8P, GOA
Released
3 Jun 2026

Explore 10SB in 3D Show helices and sheets RCSB PDB PDBe

Secondary structure: helices and β-sheets

10SB contains 17 α-helices and 27 β-strands across 3 chains. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.

Chain A: 5 helices, 6 β-strands

ElementResiduesLengthSheet
β-strand63-6531
α-helix70-723
β-strand73-82101
α-helix831
α-helix88-10417
β-strand110-11561
β-strand121-12551
α-helix128-1303
α-helix131-1344
β-strand140-14781
β-strand148-15142
Chain B: 12 helices, 20 β-strands
ElementResiduesLengthSheet
α-helix156-1605
β-strand181-18663
β-strand200-20673
α-helix209-2113
α-helix220-23516
β-strand246-25163
β-strand258-26032
α-helix261-27717
β-strand283-28753
β-strand289-29242
α-helix295-30612
β-strand310-31453
β-strand31814
β-strand32115
α-helix322-3243
β-strand325-32622
β-strand334-33963
α-helix3441
β-strand34513
α-helix3461
β-strand347-34824
β-strand351-35224
β-strand35515
β-strand361-36443
β-strand368-37146
β-strand379-38246
α-helix385-40218
α-helix408-41811
β-strand420-42123
α-helix426-4283
α-helix431-4333
β-strand440-44123
Chain D: 0 helices, 1 β-strand
ElementResiduesLengthSheet
β-strand3-426

Molecules and chains

MoleculeChainsTypeLengthOrganismUniProt
Propeptide of Proprotein convertase subtilisin/kexin type 9Aprotein122Homo sapiensQ8NBP7 (AlphaFold model)
Proprotein convertase subtilisin/kexin type 9Bprotein308Homo sapiensQ8NBP7 (AlphaFold model)
Cyclic peptide 21Dprotein9synthetic construct
Sequence of entity 1 (A), FASTA
>10SB_1 Propeptide of Proprotein convertase subtilisin/kexin type 9 (chains A)
QEDEDGDYEELVLALRSEEDGLAEAPEHGTTATFHRCAKDPWRLPGTYVVVLKEETHLSQ
SERTARRLQAQAARRGYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSSVF
AQ
Sequence of entity 2 (B), FASTA
>10SB_2 Proprotein convertase subtilisin/kexin type 9 (chains B)
SIPWNLERITPPRYRADEYQPPDGGSLVEVYLLDTSIQSDHREIEGRVMVTDFENVPEED
GTRFHRQASKCDSHGTHLAGVVSGRDAGVAKGASMRSLRVLNCQGKGTVSGTLIGLEFIR
KSQLVQPVGPLVVLLPLAGGYSRVLNAACQRLARAGVVLVTAAGNFRDDACLYSPASAPE
VITVGATNAQDQPVTLGTLGTNFGRCVDLFAPGEDIIGASSDCSTCFVSQSGTSQAAAHV
AGIAAMMLSAEPELTLAELRQRLIHFSAKDVINEAWFPEDQRVLTPNLVAALPPSTHGAG
NSHHHHHH
Sequence of entity 3 (D), FASTA
>10SB_3 Cyclic peptide 21 (chains D)
XAXXWPTYX

Ligands and cofactors

IDNameFormulaCopies
A1C8PN-{[4-(2-aminoethyl)phenyl]methyl}hexan-1-amineC15 H26 N21
GOAGlycolic acidC2 H4 O31

Water and common crystallization additives (GOL) are not listed.

Primary citation

Discovery Process of Enlicitide, a Highly Engineered Macrocyclic Peptide Therapeutic, through Issue-Driven Fragment-Based Synthetic Assembly and SAR. Josien, H., Nair, A.G., Ding, F.X. et al. J Med Chem (2026) 69:13473-13491. DOI 10.1021/acs.jmedchem.6c00463 · PubMed

Other PDB entries of the same protein (UniProt Q8NBP7 (AlphaFold model), which also has an AlphaFold model), best resolution first:

Browse structure collections

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