1DEQ: Modified bovine fibrinogen

The crystal structure of modified bovine fibrinogen (at ~4 Å resolution). Determined by X-ray diffraction at 3.5 Å resolution. Released 2 Feb 2000.

Method
X-ray diffraction
Resolution
3.5 Å
Organism
Bos taurus
Chains
14
Atoms
3,900
Mol. weight
560.54 kDa
Released
2 Feb 2000

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Molecules and chains

MoleculeChainsTypeLengthOrganismUniProt
Fibrinogen (alpha chain)A, D, N, Qprotein390Bos taurusP02672 (AlphaFold model)
Fibrinogen (beta chain)B, E, O, Rprotein408Bos taurusP02676 (AlphaFold model)
Fibrinogen (gamma chain)C, F, P, Sprotein411Bos taurusP12799 (AlphaFold model)
FibrinogenM, Zprotein90Bos taurus
Sequence of entity 1 (A, D, N, Q), FASTA
>1DEQ_1 FIBRINOGEN (ALPHA CHAIN) (chains A, D, N, Q)
EDGSDPPSGDFLTEGGGVRGPRLVERQQSACKETGWPFCSDEDWNTKCPSGCRMKGLIDE
VDQDFTSRINKLRDSLFNYQKNSKDSNTLTKNIVELMRGDFAKANNNDNTFKQINEDLRS
RIEILRRKVIEQVQRINLLQKNVRDQLVDMKRLEVDIDIKIRSCKGSCSRALEHKVDLED
YKNQQKQLEQVIAINLLPSRDIQYLPILKMSTITGPVPREFKSQLQEAPLEWKALLEMQQ
TKMVLETFGGDGHARGDSVSQGTGLAPGSPRKPGTSSIGNVNPGSYGPGSSGTWNPGRPE
PGSAGTWNPGRPEPGSAGTWNPGRPEPGSAGTWNPGRPEPGSAGTWNPGRPEPGSAGTWN
TGSSGSSSFRPDSSGHGNIRPSSPDWGTFR
Sequence of entity 2 (B, E, O, R), FASTA
>1DEQ_2 FIBRINOGEN (BETA CHAIN) (chains B, E, O, R)
KVERKPPDADGCLHADPDLGVLCPTGCKLQDTLVRQERPIRKSIEDLRNTVDSVSRTSSS
TFQYITLLKNMWKGRQNQVQDNENVVNEYSSHLEKHQLYIDETVKNNIPTKLRVLRSILE
NLRSKIQKLESDVSTQMEYCRTPCTVTCNIPVVSGKECEKIIRNEGETSEMYLIQPEDSS
KPYRVYCDMKTEKGGWTVIQNRQDGSVDFGRKWDPYKQGFGNIATNAEGKKYCGVPGEYW
LGNDRISQLTNMGPTKLLIEMEDWKGDKVTALYEGFTVQNEANKYQLSVSKYKGTAGNAL
IEGASQLVGENRTMTIHNSMFFSTYDRDNDGWKTTDPRKQCSKEDGGGWWYNRCHAANPN
GRYYWGGAYTWDMAKHGTDDGVVWMNWQGSWYSMKKMSKMIRPYFPEQ
Sequence of entity 3 (C, F, P, S), FASTA
>1DEQ_3 FIBRINOGEN (GAMMA CHAIN) (chains C, F, P, S)
YVATRDNCCILDERFGSYCPTTCGIADFLNNYQTSVDKDLRTLEGILYQVENKTSEAREL
VKAIQISYNPDQPSKPNNIESATKNSKSMMEEIMKYETLISTHESTIRFLQEIYNSNSQK
IVNLRDKVVQLEANCQEPCQDTVKIHDVTGRDCQDVANKGAKESGLYFIRPLKAKQQFLV
YCEIDGSGNGWTVFQKRLDGSLDFKKNWIQYKEGFGHLSPTGNTEFWLGNEKIHLISTQS
TIPYVLRIQLEDWNGRTSTADYASFKVTGENDKYRLTYAYFIGGDAGDAFDGYDFGDDSS
DKFFTSHNGMQFSTWDSDNDKYDGNCAEQDGSGWWMNKCHAGHLNGVYYQGGTYSKTSTP
NGYDNGIIWATWKSRWYSMKKTTMKIIPLNRLAIGEGQQHQLGGAKQAGDV
Sequence of entity 4 (M, Z), FASTA
>1DEQ_4 FIBRINOGEN (chains M, Z)
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX

Primary citation

The crystal structure of modified bovine fibrinogen. Brown, J.H., Volkmann, N., Jun, G. et al. Proc Natl Acad Sci U S A (2000) 97:85-90. DOI 10.1073/pnas.97.1.85 · PubMed

Other PDB entries of the same protein (UniProt P02672 (AlphaFold model), which also has an AlphaFold model), best resolution first:

Browse structure collections

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