1EG0: Protein

Fitting of components with known structure into an 11.5 a cryo-EM map of the e.coli 70S ribosome. Determined by electron microscopy at 11.5 Å resolution. Released 6 Mar 2000.

Method
Electron microscopy
Resolution
11.5 Å
Organism
Escherichia coli
Chains
15
Atoms
1,658
Mol. weight
224.44 kDa
Released
6 Mar 2000

Explore 1EG0 in 3D Show helices and sheets RCSB PDB PDBe

Molecules and chains

MoleculeChainsTypeLengthOrganismUniProt
Fragment of 16S rRNA helix 23IRNA33Escherichia coli
Fragment of 23S rRNALRNA57Escherichia coli
Helix 95 of 23S rRNAMRNA26Escherichia coli
Formyl-methionyl-tRNAORNA76Escherichia coli
Protein (S4 ribosomal protein)Aprotein159Escherichia coliP21466 (AlphaFold model)
Protein (S5 ribosomal protein)Bprotein148Escherichia coliP21467 (AlphaFold model)
Protein (S6 ribosomal protein)Cprotein97Escherichia coliQ5SLP8 (AlphaFold model)
Protein (S7 ribosomal protein)Dprotein146Escherichia coliP17291 (AlphaFold model)
Protein (S8 ribosomal protein)Eprotein138Escherichia coliP0DOY9
Protein (S15 ribosomal protein)Fprotein89Escherichia coliQ5SJ76
Protein (S17 ribosomal protein)Gprotein93Escherichia coliP23828
Protein (S20 ribosomal protein)Hprotein100Escherichia coli

3 more molecules are not listed.

Sequence of entity 1 (I), FASTA
>1EG0_1 FRAGMENT OF 16S RRNA HELIX 23 (chains I)
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
Sequence of entity 2 (L), FASTA
>1EG0_2 FRAGMENT OF 23S RRNA (chains L)
CUGGGAUGUUGGCUUAGAAGCAGCCAUCAUUUAAAGAGUGCGUAACAGCUCACCAGC
Sequence of entity 3 (M), FASTA
>1EG0_3 HELIX 95 OF 23S RRNA (chains M)
GCUCCUAGUACGAGAGGACCGGAGUG
Sequence of entity 4 (O), FASTA
>1EG0_4 FORMYL-METHIONYL-TRNA (chains O)
CGCGGGGUGGAGCAGCCGGUAGCUCGUCGGGCUCAUAACCCGAAGAUCGUCGGUUCAAAU
CCGGCCCCCGCAACCA
Sequence of entity 5 (A), FASTA
>1EG0_5 PROTEIN (S4 RIBOSOMAL PROTEIN) (chains A)
MKLSEYGLQLQEKQKLRHMYGVNERQFRKTFEEAGKMPGKHGENFMILLESRLDNLVYRL
GLARTRRQARQLVTHGHILVDGSRVNIPSYRVKPGQTIAVREKSRNLQVIKEALEANNYI
PDYLSFDPEKMEGTYTRLPERSELPAEINEALIVEFYSR
Sequence of entity 6 (B), FASTA
>1EG0_6 PROTEIN (S5 RIBOSOMAL PROTEIN) (chains B)
MRRINPNKLELEERVVAVNRVAKVVKGGRRLRFSALVVVGDKNGHVGFGTGKAQEVPEAI
RKAIEDAKKNLIEVPIVGTTIPHEVIGHFGAGEIILKPASEGTGVIAGGPARAVLELAGI
SDILSKSIGSNTPINMVRATFDGLKQLK
Sequence of entity 7 (C), FASTA
>1EG0_7 PROTEIN (S6 RIBOSOMAL PROTEIN) (chains C)
MRRYEVNIVLNPNLDQSQLALEKEIIQRALENYGARVEKVEELGLRRLAYPIAKDPQGYF
LWYQVEMPEDRVNDLARELRIRDNVRRVMVVKSQEPF
Sequence of entity 8 (D), FASTA
>1EG0_8 PROTEIN (S7 RIBOSOMAL PROTEIN) (chains D)
MARRRRAEVRQLQPDLVYGDVLVTAFINKIMRDGKKNLAARIFYDACKIIQEKTGQEPLK
VFKQAVENVKPRMEVRSRRVGGANYQVPMEVSPRRQQSLALRWLVQAANQRPERRAAVRI
AHELMDAAEGKGGAVKKKEDVERMAE
Sequence of entity 9 (E), FASTA
>1EG0_9 PROTEIN (S8 RIBOSOMAL PROTEIN) (chains E)
MLTDPIADMLTRIRNATRVYKESTDVPASRFKEEILRILAREGFIKGYERVDVDGKPYLR
VYLKYGPRRQGPDPRPEQVIHHIRRISKPGRRVYVGVKEIPRVRRGLGIAILSTSKGVLT
DREARKLGVGGELICEVW
Sequence of entity 10 (F), FASTA
>1EG0_10 PROTEIN (S15 RIBOSOMAL PROTEIN) (chains F)
MPITKEEKQKVIQEFARFPGDTGSTEVQVALLTLRINRLSEHLKVHKKDHHSHRGLLMMV
GQRRRLLRYLQREDPERYRALIEKLGIRG
Sequence of entity 11 (G), FASTA
>1EG0_11 PROTEIN (S17 RIBOSOMAL PROTEIN) (chains G)
SERNQRKVYVGRVVSDKMDKTITVLVETYKKHPLYGKRVKYSKKYKAHDEHNEAKVGDIV
KIMETRPLSATKRFRLVEIVEKAVRAGAGAGAA
Sequence of entity 12 (H), FASTA
>1EG0_12 PROTEIN (S20 RIBOSOMAL PROTEIN) (chains H)
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX

Primary citation

Solution structure of the E. coli 70S ribosome at 11.5 A resolution. Gabashvili, I.S., Agrawal, R.K., Spahn, C.M. et al. Cell (2000) 100:537-549. DOI 10.1016/S0092-8674(00)80690-X · PubMed

Other PDB entries of the same protein (UniProt P21466 (AlphaFold model), which also has an AlphaFold model), best resolution first:

Browse structure collections

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