1M0F: Scaffolding protein D

Structural Studies of Bacteriophage alpha3 Assembly, Cryo-electron microscopy. Determined by electron microscopy at 16.0 Å resolution. Released 25 Dec 2002.

Method
Electron microscopy
Resolution
16.0 Å
Organism
Enterobacteria phage alpha3
Chains
7
Atoms
1,179
Mol. weight
144.86 kDa
Released
25 Dec 2002

Explore 1M0F in 3D Show helices and sheets RCSB PDB PDBe

Molecules and chains

MoleculeChainsTypeLengthOrganismUniProt
Scaffolding protein D1, 2, 3, 4protein152Enterobacteria phage alpha3P69486
Capsid Protein FFprotein431Enterobacteria phage alpha3P08767
Major Spike Protein GGprotein187Enterobacteria phage alpha3P31281
Scaffolding Protein BBprotein68Enterobacteria phage alpha3
Sequence of entity 1 (1, 2, 3, 4), FASTA
>1M0F_1 Scaffolding protein D (chains 1, 2, 3, 4)
MSQVTEQSVRFQTALASIKLIQASAVLDLTEDDFDFLTSNKVWIATDRSRARRCVEACVY
GTLDFVGYPRFPAPVEFIAAVIAYYVHPVNIQTACLIMEGAEFTENIINGVERPVKAAEL
FAFTLRVRAGNTDVLTDAEENVRQKLRAEGVM
Sequence of entity 2 (F), FASTA
>1M0F_2 Capsid Protein F (chains F)
MSNVQTSAEREIVDLSHLAFDCGMLGRLKTVSWTPVIAGDSFELDAVGALRLSPLRRGLA
IDSKVDFFTFYIPHRHVYGDQWIQFMRDGVNAQPLPSVTCNRYPDHAGYVGTIVPANNRI
PKFLHQSYLNIYNNYFRAPWMPERTEANPSNLNEDDARYGFRCCHLKNIWSAPLPPETKL
AEEMGIESNSIDIMGLQAAYAQLHTEQERTYFMQRYRDVISSFGGSTSYDADNRPLLVMH
TDFWASGYDVDGTDQSSLGQFSGRVQQTFKHSVPRFFVPEHGVMMTLALIRFPPISPLEH
HYLAGKSQLTYTDLAGDPALIGNLPPREISYRDLFRDGRSGIKIKVAESIWYRTHPDYVN
FKYHDLHGFPFLDDAPGTSTGDNLQEAILVRHQDYDACFQSQQLLQWNKQARYNVSVYRH
MPTVRDSIMTS
Sequence of entity 3 (G), FASTA
>1M0F_3 Major Spike Protein G (chains G)
MYQNFVTKHDTAIQTSRFSVTGNVIPAAPTGNIPVINGGSITAERAVVNLYANMNVSTSS
DGSFIVAMKVDTSPTDPNCVISAGVNLSFAGTSYPIVGIVRFESASEQPTSIAGSEVEHY
PIEMSVGSGGVCSARDCATVDIHPRTSGNNVFVGVICSSAKWTSGRVIGTIATTQVIHEY
QVLQPLK
Sequence of entity 4 (B), FASTA
>1M0F_4 Scaffolding Protein B (chains B)
MEQLTKNQRKKRDEIEAGKSYCSRRFGGATCDDKSAQIYARFDKNDWRIQPAEFYRFHDA
EVNTFGYF

Primary citation

Structural Studies of Bacteriophage alpha3 Assembly. Bernal, R.A., Hafenstein, S., Olson, N.H. et al. J Mol Biol (2003) 325:11-24. DOI 10.1016/S0022-2836(02)01201-9 · PubMed

Other PDB entries of the same protein (UniProt P69486), best resolution first:

Browse structure collections

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