1P3Y: MrsD from Bacillus sp. HIL-Y85/54728

MrsD from Bacillus sp. HIL-Y85/54728. Determined by X-ray diffraction at 2.54 Å resolution. Released 5 Aug 2003.

Method
X-ray diffraction
Resolution
2.54 Å
Organism
Bacillus sp.
Chains
1
Atoms
1,461
Mol. weight
22.49 kDa
Ligands
FAD
Released
5 Aug 2003

Explore 1P3Y in 3D Show helices and sheets RCSB PDB PDBe

Secondary structure: helices and β-sheets

1P3Y contains 14 α-helices and 8 β-strands across 1 chain. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.

Chain 1: 14 helices, 8 β-strands

ElementResiduesLengthSheet
α-helix6-83
β-strand10-1561
α-helix19-235
α-helix25-317
β-strand37-4261
α-helix44-496
α-helix52-554
α-helix56-583
β-strand61-6331
α-helix72-743
α-helix75-817
β-strand84-9071
α-helix92-998
α-helix106-1138
β-strand119-12241
α-helix126-1294
α-helix132-14413
β-strand147-14821
α-helix149-1513
β-strand15212
β-strand16912
α-helix173-18311

Molecules and chains

MoleculeChainsTypeLengthOrganismUniProt
MrsD protein1protein194Bacillus sp.Q9RC23 (AlphaFold model)
Sequence of entity 1 (1), FASTA
>1P3Y_1 MrsD protein (chains 1)
MSISILKDKKLLIGICGSISSVGISSYLLYFKSFFKEIRVVMTKTAEDLIPAHTVSYFCD
HVYSEHGENGKRHSHVEIGRWADIYCIIPATANILGQTANGVAMNLVATTVLAHPHNTIF
FPNMNDLMWNKTVVSRNIEQLRKDGHIVIEPVEIMAFEIATGTRKPNRGLITPDKALLAI
EKGFKERTKHPSLT

Ligands and cofactors

IDNameFormulaCopies
FADFlavin-adenine dinucleotideC27 H33 N9 O15 P21

Primary citation

Structure of MrsD, an FAD-binding protein of the HFCD family. Blaesse, M., Kupke, T., Huber, R. et al. Acta Crystallogr D Biol Crystallogr (2003) 59:1414-1421. DOI 10.1107/S0907444903011831 · PubMed

Other PDB entries of the same protein (UniProt Q9RC23 (AlphaFold model), which also has an AlphaFold model), best resolution first:

Browse structure collections

About this viewer

MolViewer shows 1P3Y directly in your browser with nothing to install. Switch between cartoon, ball-and-stick, spacefill and surface views, color by chain, secondary structure or B-factor, measure distances, angles and dihedrals, and share or embed the view.