2DNR: RNA binding domain in Synaptojanin 1

Solution structure of RNA binding domain in Synaptojanin 1. Determined by solution NMR. Released 26 Oct 2006.

Method
Solution NMR
Organism
Homo sapiens
Chains
1
Atoms
679
Mol. weight
9.66 kDa
Released
26 Oct 2006

Explore 2DNR in 3D Show helices and sheets RCSB PDB PDBe

Secondary structure: helices and β-sheets

2DNR contains 3 α-helices and 5 β-strands across 1 chain. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.

Chain A: 3 helices, 5 β-strands

ElementResiduesLengthSheet
β-strand894-90071
α-helix911-92212
β-strand927-93261
β-strand937-94151
α-helix944-9496
α-helix950-9534
β-strand957-95821
β-strand961-96771

Molecules and chains

MoleculeChainsTypeLengthOrganismUniProt
Synaptojanin-1Aprotein91Homo sapiensO43426 (AlphaFold model)
Sequence of entity 1 (A), FASTA
>2DNR_1 Synaptojanin-1 (chains A)
GSSGSSGGTVLVSIKSSLPENNFFDDALIDELLQQFASFGEVILIRFVEDKMWVTFLEGS
SALNVLSLNGKELLNRTITIALKSPSGPSSG

Primary citation

Solution structure of RNA binding domain in Synaptojanin 1. Tsuda, K., Muto, Y., Inoue, M. et al. To be published.

Other PDB entries of the same protein (UniProt O43426 (AlphaFold model), which also has an AlphaFold model), best resolution first:

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