3ONH: Ubiquitin-activating enzyme E1-like

Crystal structure of UBA2ufd-Ubc9: insights into E1-E2 interactions in Sumo pathways. Determined by X-ray diffraction at 1.6 Å resolution. Released 12 Jan 2011.

Method
X-ray diffraction
Resolution
1.6 Å
Organism
Saccharomyces cerevisiae
Chains
1
Atoms
966
Mol. weight
14.32 kDa
Released
12 Jan 2011

Explore 3ONH in 3D Show helices and sheets RCSB PDB PDBe

Secondary structure: helices and β-sheets

3ONH contains 4 α-helices and 11 β-strands across 1 chain. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.

Chain A: 4 helices, 11 β-strands

ElementResiduesLengthSheet
β-strand442-44871
α-helix450-4556
β-strand45712
α-helix458-46912
β-strand475-47951
β-strand484-48851
β-strand49111
β-strand49812
β-strand509-51461
β-strand520-52233
α-helix523-5242
β-strand525-53171
α-helix535-5362
β-strand540-54121
β-strand549-55133

Molecules and chains

MoleculeChainsTypeLengthOrganismUniProt
Ubiquitin-activating enzyme E1-likeAprotein127Saccharomyces cerevisiaeP52488 (AlphaFold model)
Sequence of entity 1 (A), FASTA
>3ONH_1 Ubiquitin-activating enzyme E1-like (chains A)
GSSKVCRGVIKLSSDCLNKMKLSDFVVLIREKYSYPQDISLLDASNQRLLFDYDFEDLND
RTLSEINLGNGSIILFSDEEGDTMIRKAIELFLDVDDELPCNTCSLPDVEVPLIKANNSP
SKNEEEE

Primary citation

Crystal structure of UBA2(ufd)-Ubc9: insights into E1-E2 interactions in Sumo pathways. Wang, J., Taherbhoy, A.M., Hunt, H.W. et al. PLoS One (2010) 5:e15805-e15805. DOI 10.1371/journal.pone.0015805 · PubMed

Other PDB entries of the same protein (UniProt P52488 (AlphaFold model), which also has an AlphaFold model), best resolution first:

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