3PVB: PDB entry 3PVB

Crystal structure of (73-244)RIa:C holoenzyme of cAMP-dependent Protein kinase. Determined by X-ray diffraction at 3.3 Å resolution. Released 2 Feb 2011.

Method
X-ray diffraction
Resolution
3.3 Å
Organisms
Mus musculus, Bos taurus
Chains
2
Atoms
4,046
Mol. weight
59.05 kDa
Ligands
ANP, MN
Released
2 Feb 2011

Explore 3PVB in 3D Show helices and sheets RCSB PDB PDBe

Secondary structure: helices and β-sheets

3PVB contains 23 α-helices and 28 β-strands across 2 chains. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.

Chain A: 16 helices, 17 β-strands

ElementResiduesLengthSheet
α-helix11-3020
β-strand43-4421
β-strand48-5142
β-strand56-5832
β-strand61-6221
β-strand6811
β-strand69-7572
α-helix76-816
α-helix85-9713
β-strand106-11162
β-strand115-12172
β-strand12713
α-helix130-1334
α-helix140-15819
β-strand16314
α-helix169-1713
β-strand17215
β-strand17313
β-strand18215
β-strand18914
β-strand19516
β-strand199-20027
α-helix202-2043
α-helix207-2115
β-strand21516
α-helix218-23114
α-helix243-25210
α-helix263-27210
α-helix277-2793
α-helix289-2924
α-helix295-2973
α-helix302-3076
α-helix328-3292
Chain B: 7 helices, 11 β-strands
ElementResiduesLengthSheet
α-helix92-943
β-strand98-9927
α-helix105-1084
α-helix120-12910
α-helix141-1444
α-helix146-1505
β-strand152-15658
β-strand16319
β-strand168110
β-strand171-17888
β-strand180-18349
β-strand188-19259
β-strand197-19828
α-helix202-2054
β-strand208110
β-strand212-21439
β-strand219-22578
α-helix226-23813

Molecules and chains

MoleculeChainsTypeLengthOrganismUniProt
cAMP-dependent protein kinase catalytic subunit alphaAprotein345Mus musculusP05132 (AlphaFold model)
cAMP-dependent protein kinase type I-alpha regulatory subunitBprotein160Bos taurusP00514 (AlphaFold model)
Sequence of entity 1 (A), FASTA
>3PVB_1 cAMP-dependent protein kinase catalytic subunit alpha (chains A)
AKKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKES
GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG
GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDF
GFAKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ
IYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI
YQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRVSINEKCGKEFTEF
Sequence of entity 2 (B), FASTA
>3PVB_2 cAMP-dependent protein kinase type I-alpha regulatory subunit (chains B)
PPNPVVKGRRRRGAISAEVYTEEDAASYVRKVIPKDYKTMAALAKAIEKNVLFSHLDDNE
RSDIFDAMFPVSFIAGETVIQQGDEGDNFYVIDQGEMDVYVNNEWATSVGEGGSFGELAL
IYGTPRAATVKAKTNVKLWGIDRDSYRRILMGSTLRKRKM

Ligands and cofactors

IDNameFormulaCopies
ANPPhosphoaminophosphonic acid-adenylate esterC10 H17 N6 O12 P31
MNManganese (II) ionMn2

Water and common crystallization additives (GOL) are not listed.

Primary citation

Crystal structure of (73-244)RIa:C holoenzyme of cAMP-dependent Protein kinase. Boettcher, A.J., Wu, J., Kim, C. et al. Structure (2011) 19:265-276. DOI 10.1016/j.str.2010.12.005 · PubMed

Other PDB entries of the same protein (UniProt P05132 (AlphaFold model), which also has an AlphaFold model), best resolution first:

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