3VHS: UBZ of human WRNIP1

Crystal structure of UBZ of human WRNIP1. Determined by X-ray diffraction at 1.9 Å resolution. Released 10 Oct 2012.

Method
X-ray diffraction
Resolution
1.9 Å
Organism
Homo sapiens
Chains
2
Atoms
423
Mol. weight
6.66 kDa
Ligands
ZN
Released
10 Oct 2012

Explore 3VHS in 3D Show helices and sheets RCSB PDB PDBe

Secondary structure: helices and β-sheets

3VHS contains 3 α-helices and 4 β-strands across 2 chains. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.

Chain A: 2 helices, 2 β-strands

ElementResiduesLengthSheet
β-strand17-1931
β-strand26-2831
α-helix29-313
α-helix32-398
Chain B: 1 helix, 2 β-strands
ElementResiduesLengthSheet
β-strand17-1932
β-strand26-2832
α-helix29-357

Molecules and chains

MoleculeChainsTypeLengthOrganismUniProt
ATPase WRNIP1A, Bprotein29Homo sapiensQ96S55 (AlphaFold model)
Sequence of entity 1 (A, B), FASTA
>3VHS_1 ATPase WRNIP1 (chains A, B)
GSPEFQVQCPVCQQMMPAAHINSHLDRCL

Ligands and cofactors

IDNameFormulaCopies
ZNZinc ionZn2

Water and common crystallization additives (NA) are not listed.

Primary citation

A novel mode of ubiquitin recognition by the ubiquitin-binding zinc finger domain of WRNIP1. Suzuki, N., Rohaim, A., Kato, R. et al. FEBS J (2016). DOI 10.1111/febs.13734 · PubMed

Other PDB entries of the same protein (UniProt Q96S55 (AlphaFold model), which also has an AlphaFold model), best resolution first:

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