4C8P: E3 ubiquitin-protein ligase ZNRF3

mouse ZNRF3 ectodomain crystal form V, disulfide-bridged S90C variant. Determined by X-ray diffraction at 2.1 Å resolution. Released 20 Nov 2013.

Method
X-ray diffraction
Resolution
2.1 Å
Organism
MUS MUSCULUS
Chains
1
Atoms
1,129
Mol. weight
18.22 kDa
Released
20 Nov 2013

Explore 4C8P in 3D Show helices and sheets RCSB PDB PDBe

Secondary structure: helices and β-sheets

4C8P contains 5 α-helices and 9 β-strands across 1 chain. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.

Chain A: 5 helices, 9 β-strands

ElementResiduesLengthSheet
β-strand55-65111
α-helix701
β-strand71-82121
β-strand8612
β-strand91-9771
α-helix100-1034
β-strand117-12261
α-helix136-14510
β-strand148-15471
α-helix161-1655
β-strand17312
β-strand177-18041
α-helix182-19413
β-strand199-20351

Molecules and chains

MoleculeChainsTypeLengthOrganismUniProt
E3 ubiquitin-protein ligase ZNRF3Aprotein165MUS MUSCULUSQ5SSZ7 (AlphaFold model)
Sequence of entity 1 (A), FASTA
>4C8P_1 E3 UBIQUITIN-PROTEIN LIGASE ZNRF3 (chains A)
ETGKETAFVEVVLFESSPSGDYTTHTTGLTGRFSRAGAMLCAEGEIVQMHPLGLCNNNDE
EDLYEYGWVGVVKLEQPELDPKPCLTVLGKAKRAVQRGATAVIFDVSENPEAIDQLNQGS
EDPLKRPVVYVKGADAIKLMNIVNKQKVARARIQHLGTKHHHHHH

Primary citation

Structural and Molecular Basis of Znrf3/Rnf43 Transmembrane Ubiquitin Ligase Inhibition by the Wnt Agonist R-Spondin. Zebisch, M., Xu, Y., Krastev, C. et al. Nat Commun (2013) 4:2787. DOI 10.1038/NCOMMS3787 · PubMed

Other PDB entries of the same protein (UniProt Q5SSZ7 (AlphaFold model), which also has an AlphaFold model), best resolution first:

Browse structure collections

About this viewer

MolViewer shows 4C8P directly in your browser with nothing to install. Switch between cartoon, ball-and-stick, spacefill and surface views, color by chain, secondary structure or B-factor, measure distances, angles and dihedrals, and share or embed the view.