4F1P: PDB entry 4F1P

Crystal Structure of mutant S554D for ArfGAP and ANK repeat domain of ACAP1. Determined by X-ray diffraction at 2.3 Å resolution. Released 18 Jul 2012.

Method
X-ray diffraction
Resolution
2.3 Å
Organism
Homo sapiens
Chains
2
Atoms
3,860
Mol. weight
78.7 kDa
Ligands
ZN
Released
18 Jul 2012

Explore 4F1P in 3D Show helices and sheets RCSB PDB PDBe

Secondary structure: helices and β-sheets

4F1P contains 32 α-helices and 10 β-strands across 2 chains. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.

Chain A: 15 helices, 5 β-strands

ElementResiduesLengthSheet
α-helix408-4125
β-strand41911
β-strand42611
β-strand430-43232
β-strand437-43932
α-helix441-45010
β-strand457-45932
α-helix467-4759
α-helix478-4858
α-helix503-5108
α-helix511-5155
α-helix571-5799
α-helix5831
α-helix585-5939
α-helix610-6167
α-helix620-6289
α-helix643-6508
α-helix653-6619
α-helix676-6827
α-helix686-69611
Chain B: 17 helices, 5 β-strands
ElementResiduesLengthSheet
α-helix408-4125
β-strand41913
β-strand42613
β-strand430-43234
β-strand437-43934
α-helix441-45010
β-strand457-45934
α-helix467-4759
α-helix478-4858
α-helix489-4924
α-helix494-4974
α-helix503-5108
α-helix511-5155
α-helix571-5799
α-helix5831
α-helix585-5939
α-helix610-6167
α-helix620-6289
α-helix643-6508
α-helix653-6619
α-helix676-6827
α-helix686-69611

Molecules and chains

MoleculeChainsTypeLengthOrganismUniProt
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 1A, Bprotein368Homo sapiensQ15027 (AlphaFold model)
Sequence of entity 1 (A, B), FASTA
>4F1P_1 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 1 (chains A, B)
GPLGSGSGHLAIGSAATLGSGGMARGREPGGVGHVVAQVQSVDGNAQCCDCREPAPEWAS
INLGVTLCIQCSGIHRSLGVHFSKVRSLTLDSWEPELVKLMCELGNVIINQIYEARVEAM
AVKKPGPSCSRQEKEAWIHAKYVEKKFLTKLPEIRGRRGGRGRPRGQPPVPPKPSIRPRP
GDLRSKPEPPSEDLGSLHPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLI
QATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSE
GRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRDFSLMASDDPEKLSR
RSHDLHTL

Ligands and cofactors

IDNameFormulaCopies
ZNZinc ionZn2

Water and common crystallization additives (SO4) are not listed.

Primary citation

Mechanistic insights into regulated cargo binding by ACAP1 protein. Bai, M., Pang, X., Lou, J. et al. J Biol Chem (2012) 287:28675-28685. DOI 10.1074/jbc.M112.378810 · PubMed

Other PDB entries of the same protein (UniProt Q15027 (AlphaFold model), which also has an AlphaFold model), best resolution first:

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