4H3B: JNK3

Crystal Structure of JNK3 in Complex with SAB Peptide. Determined by X-ray diffraction at 2.08 Å resolution. Released 21 Nov 2012.

Method: X-ray diffraction
Resolution: 2.08 Å
Organism: Homo sapiens
Chains: 4
Atoms: 6,336
Mol. weight: 84.47 kDa
Released: 21 Nov 2012

Explore 4H3B in 3D Show helices and sheets RCSB PDB PDBe

Secondary structure: helices and β-sheets

4H3B contains 47 α-helices and 22 β-strands across 3 chains. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.

Chain A: 23 helices, 11 β-strands

Element	Residues	Length	Sheet
β-strand	48-53	6	1
β-strand	56-61	6	1
β-strand	64-73	10	2
β-strand	76-83	8	2
β-strand	88-95	8	2
α-helix	102-116	15
β-strand	123	1	3
β-strand	126-130	5	2
β-strand	143-147	5	2
β-strand	151-152	2	3
α-helix	153-158	6
α-helix	163-182	20
α-helix	192-194	3
β-strand	195-197	3	3
β-strand	203-205	3	3
α-helix	216-219	4
α-helix	227-229	3
α-helix	232-235	4
α-helix	244-258	15
α-helix	268-279	12
α-helix	281-283	3
α-helix	284-287	4
α-helix	292-299	8
α-helix	302-303	2
α-helix	309-312	4
α-helix	315-317	3
α-helix	326-339	14
α-helix	344-346	3
α-helix	348-349	2
α-helix	350-355	6
α-helix	357-360	4
α-helix	365-368	4
α-helix	378-380	3
α-helix	387-399	13

Chain B: 1 helix, 0 β-strands

Element	Residues	Length	Sheet
α-helix	342-344	3

Chain C: 23 helices, 11 β-strands

Element	Residues	Length	Sheet
β-strand	48-53	6	4
β-strand	56-61	6	4
β-strand	64-73	10	5
β-strand	76-83	8	5
β-strand	88-95	8	5
α-helix	102-116	15
β-strand	123	1	6
β-strand	126-130	5	5
β-strand	143-147	5	5
β-strand	151-152	2	6
α-helix	153-157	5
α-helix	163-182	20
α-helix	192-194	3
β-strand	195-197	3	6
β-strand	203-205	3	6
α-helix	216-219	4
α-helix	227-229	3
α-helix	232-235	4
α-helix	244-258	15
α-helix	268-279	12
α-helix	281-283	3
α-helix	284-287	4
α-helix	292-299	8
α-helix	309-312	4
α-helix	315-317	3
α-helix	329-339	11
α-helix	344-346	3
α-helix	348-349	2
α-helix	350-355	6
α-helix	357-360	4
α-helix	365-368	4
α-helix	370-372	3
α-helix	378-380	3
α-helix	387-399	13

Molecules and chains

Molecule	Chains	Type	Length	Organism	UniProt
Mitogen-activated protein kinase 10	A, C	protein	356	Homo sapiens	P53779 (AlphaFold model)
SH3 domain-binding protein 5	B, D	protein	10	Homo sapiens	O60239 (AlphaFold model)

Sequence of entity 1 (A, C), FASTA

>4H3B_1 Mitogen-activated protein kinase 10 (chains A, C)
DNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTH
AKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHE
RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYV
VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCP
EFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDP
AKRISVDDALQHPYINVWYDPAEVEAPPPQIYDKQLDEREHTIEEWKELIYKEVMN

Sequence of entity 2 (B, D), FASTA

>4H3B_2 SH3 domain-binding protein 5 (chains B, D)
VVRPGSLDLP

Primary citation

Structural Mechanisms of Allostery and Autoinhibition in JNK Family Kinases. Laughlin, J.D., Nwachukwu, J.C., Figuera-Losada, M. et al. Structure (2012) 20:2174-2184. DOI 10.1016/j.str.2012.09.021 · PubMed

Other PDB entries of the same protein (UniProt P53779 (AlphaFold model), which also has an AlphaFold model), best resolution first:

3OY1 1.7 Å, Highly Selective c-Jun N-Terminal Kinase (JNK) 2 and 3 Inhibitors with In Vitro CNS-like…
7ORF 1.7 Å, Crystal structure of JNK3 in complex with FMU-001-367 (compound 1)
7KSI 1.73 Å, Thiophenyl-Pyrazolourea Derivatives as Potent, Brian Penetrant, Orally Bioavailable, and…
6EMH 1.76 Å, Crystal structure of JNK3 in complex with a pyridinylimidazole inhibitor
4WHZ 1.79 Å, Design and Synthesis of Highly Potent and Isoform Selective JNK3 Inhibitors: SAR Studies…
6EQ9 1.83 Å, Crystal structure of JNK3 in complex with AMP-PCP
7KSK 1.84 Å, Thiophenyl-Pyrazolourea Derivatives as Potent, Brian Penetrant, Orally Bioavailable, and…
8WGF 1.85 Å, The Crystal Structure of JNK3 from Biortus.
8BZP 1.86 Å, JNK3 (Mitogen-activated protein kinase 10) in Complex with Compound 23 bearing a…
2B1P 1.9 Å, inhibitor complex of JNK3
4W4W 1.9 Å, JNK2/3 in complex with N-(2-methylpyridin-4-yl)-3-{4-[(phenylcarbamoyl)amino]-1H-pyrazol-…
4X21 1.95 Å, The MAP kinase JNK3 as target for halogen bonding

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