4NN2: PHD finger protein 6

Protein Crystal Structure of Human Borjeson-Forssman-Lehmann Syndrome Associated Protein PHF6. Determined by X-ray diffraction at 1.47 Å resolution. Released 26 Feb 2014.

Method
X-ray diffraction
Resolution
1.47 Å
Organism
Homo sapiens
Chains
2
Atoms
2,174
Mol. weight
29.37 kDa
Ligands
ZN
Released
26 Feb 2014

Explore 4NN2 in 3D Show helices and sheets RCSB PDB PDBe

Secondary structure: helices and β-sheets

4NN2 contains 15 α-helices and 18 β-strands across 2 chains. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.

Chain A: 8 helices, 9 β-strands

ElementResiduesLengthSheet
α-helix219-2213
α-helix222-2254
α-helix2271
β-strand228-23031
β-strand237-23931
α-helix240-2445
α-helix249-2502
β-strand25112
β-strand26312
α-helix265-27511
β-strand290-29123
β-strand29214
β-strand300-30123
α-helix303-3086
β-strand312-31654
β-strand321-32554
α-helix327-3293
Chain B: 7 helices, 9 β-strands
ElementResiduesLengthSheet
α-helix219-2213
α-helix222-2254
β-strand228-23035
β-strand237-23935
α-helix240-2456
α-helix249-2502
β-strand25116
β-strand26316
α-helix265-27511
β-strand290-29127
β-strand29218
β-strand300-30127
α-helix303-3086
β-strand312-31658
α-helix317-3193
β-strand321-32558

Molecules and chains

MoleculeChainsTypeLengthOrganismUniProt
PHD finger protein 6A, Bprotein129Homo sapiensQ8IWS0 (AlphaFold model)
Sequence of entity 1 (A, B), FASTA
>4NN2_1 PHD finger protein 6 (chains A, B)
GPSTRPKCGFCHVGEEENEARGKLHIFNAKKAAAHYKCMLFSSGTVQLTTTSRAEFGDFD
IKTVLQEIKRGKRMKCTLCSQPGATIGCEIKACVKTYHYHCGVQDKAKYIENMSRGIYKL
YCKNHSGND

Ligands and cofactors

IDNameFormulaCopies
ZNZinc ionZn6

Water and common crystallization additives (GOL) are not listed.

Primary citation

Crystal Structure of the second extended PHD domain of human PHF6 protein. Liu, Z., Li, F., Zhang, J. et al. J Biol Chem (2014).

Other PDB entries of the same protein (UniProt Q8IWS0 (AlphaFold model), which also has an AlphaFold model), best resolution first:

Browse structure collections

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