4UX9: JNK1

Crystal structure of JNK1 bound to a MKK7 docking motif. Determined by X-ray diffraction at 2.34 Å resolution. Released 25 Mar 2015.

Method
X-ray diffraction
Resolution
2.34 Å
Organism
HOMO SAPIENS
Chains
8
Atoms
11,697
Mol. weight
177.52 kDa
Ligands
ANP
Released
25 Mar 2015

Explore 4UX9 in 3D Show helices and sheets RCSB PDB PDBe

Secondary structure: helices and β-sheets

4UX9 contains 100 α-helices and 56 β-strands across 5 chains. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.

Chain A: 24 helices, 15 β-strands

ElementResiduesLengthSheet
β-strand10-1561
β-strand18-2361
β-strand26-3382
β-strand39-4572
β-strand50-5782
α-helix64-7916
β-strand8513
α-helix86-872
β-strand88-9252
β-strand104-10962
α-helix110-1112
β-strand113-11423
α-helix116-1194
α-helix125-14420
β-strand14814
α-helix154-1563
β-strand157-15933
β-strand165-16733
β-strand17414
β-strand17715
α-helix189-1913
α-helix194-1974
β-strand20215
α-helix206-22015
α-helix232-24110
α-helix243-2453
α-helix246-2494
α-helix254-2618
α-helix264-2652
α-helix271-2744
α-helix277-2793
α-helix281-2822
α-helix291-30111
α-helix310-3112
α-helix312-3176
α-helix322-3243
α-helix327-3304
α-helix332-3354
α-helix349-36214
Chain B: 26 helices, 13 β-strands
ElementResiduesLengthSheet
β-strand10-1566
β-strand18-2366
β-strand26-3387
β-strand40-4567
β-strand50-5897
α-helix60-623
α-helix64-7916
β-strand8518
α-helix86-872
β-strand88-9257
β-strand103-10977
β-strand113-11428
α-helix115-1195
α-helix122-1243
α-helix125-14319
β-strand14819
α-helix154-1563
β-strand157-16048
β-strand164-16748
β-strand17419
α-helix189-1913
α-helix194-1974
α-helix206-22015
α-helix232-24110
α-helix244-2452
α-helix246-2505
α-helix254-2618
α-helix264-2652
α-helix271-2744
α-helix277-2793
α-helix281-2833
α-helix291-30111
α-helix306-3083
α-helix310-3112
α-helix312-3165
α-helix322-3243
α-helix327-3304
α-helix332-3365
α-helix354-3618
Chain C: 24 helices, 13 β-strands
ElementResiduesLengthSheet
β-strand10-15610
β-strand18-23610
β-strand26-34911
β-strand39-45711
β-strand50-58911
α-helix64-7916
β-strand85112
α-helix86-872
β-strand88-92511
β-strand103-109711
α-helix110-1112
β-strand113-114212
α-helix115-1195
α-helix125-14420
β-strand148113
α-helix154-1563
β-strand157-159312
β-strand165-167312
β-strand174113
α-helix189-1913
α-helix194-1974
α-helix206-22015
α-helix232-24110
α-helix243-2453
α-helix246-2494
α-helix254-2629
α-helix264-2652
α-helix271-2744
α-helix277-2793
α-helix291-30111
α-helix306-3083
α-helix310-3112
α-helix312-3165
α-helix322-3243
α-helix327-3304
α-helix332-3365
α-helix349-36214
Chain D: 25 helices, 15 β-strands
ElementResiduesLengthSheet
β-strand10-15614
β-strand18-23614
β-strand26-31615
β-strand40-45615
β-strand50-56715
α-helix64-7916
β-strand85116
α-helix86-872
β-strand88-92515
β-strand105-109515
α-helix110-1112
β-strand113-114216
α-helix115-1195
α-helix122-1243
α-helix125-14319
β-strand148117
α-helix154-1563
β-strand157-159316
β-strand165-167316
β-strand174117
β-strand177118
α-helix194-1974
β-strand202118
α-helix206-22015
α-helix232-24110
α-helix243-2453
α-helix246-2494
α-helix254-2629
α-helix264-2652
α-helix271-2744
α-helix277-2793
α-helix281-2822
α-helix291-30111
α-helix306-3083
α-helix310-3112
α-helix312-3176
α-helix322-3243
α-helix327-3304
α-helix332-3354
α-helix349-36315
Chain I: 1 helix, 0 β-strands
ElementResiduesLengthSheet
α-helix38-403

Molecules and chains

MoleculeChainsTypeLengthOrganismUniProt
Mitogen-activated protein kinase 8A, B, C, Dprotein364HOMO SAPIENSP45983 (AlphaFold model)
Dual specificity mitogen-activated protein kinase kinase 7F, G, H, Iprotein12HOMO SAPIENSO14733 (AlphaFold model)
Sequence of entity 1 (A, B, C, D), FASTA
>4UX9_1 MITOGEN-ACTIVATED PROTEIN KINASE 8 (chains A, B, C, D)
MSRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP
FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ
MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF
MMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQ
LGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSK
MLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIPDKQLDEREHTIEEWKELIYKEV
MDLE
Sequence of entity 2 (F, G, H, I), FASTA
>4UX9_2 DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 7 (chains F, G, H, I)
QRPRPTLQLPLA

Ligands and cofactors

IDNameFormulaCopies
ANPPhosphoaminophosphonic acid-adenylate esterC10 H17 N6 O12 P34

Water and common crystallization additives (SO4) are not listed.

Primary citation

Structure and Dynamics of the Mkk7-Jnk Signaling Complex. Kragelj, J., Palencia, A., Nanao, M.H. et al. Proc Natl Acad Sci U S A (2015) 112:3409. DOI 10.1073/PNAS.1419528112 · PubMed

Other PDB entries of the same protein (UniProt P45983 (AlphaFold model), which also has an AlphaFold model), best resolution first:

Browse structure collections

About this viewer

MolViewer shows 4UX9 directly in your browser with nothing to install. Switch between cartoon, ball-and-stick, spacefill and surface views, color by chain, secondary structure or B-factor, measure distances, angles and dihedrals, and share or embed the view.