4Y05: KIF2C short Loop2 construct

KIF2C short Loop2 construct. Determined by X-ray diffraction at 2.59 Å resolution. Released 17 Jun 2015.

Method
X-ray diffraction
Resolution
2.59 Å
Organism
Homo sapiens
Chains
1
Atoms
2,627
Mol. weight
44.17 kDa
Ligands
MG, ADP
Released
17 Jun 2015

Explore 4Y05 in 3D Show helices and sheets RCSB PDB PDBe

Secondary structure: helices and β-sheets

4Y05 contains 18 α-helices and 19 β-strands across 1 chain. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.

Chain A: 18 helices, 19 β-strands

ElementResiduesLengthSheet
α-helix232-24211
β-strand24611
α-helix253-2542
β-strand259-26572
α-helix266-2694
α-helix270-2745
β-strand27913
β-strand281-28224
β-strand28511
β-strand288-29774
β-strand304-31074
β-strand313-31532
α-helix321-3277
α-helix330-3378
β-strand341-34772
α-helix354-3585
α-helix373-38513
α-helix388-3914
β-strand396-405102
β-strand408-41142
β-strand417-41932
β-strand420-42345
β-strand429-43245
β-strand437-43932
α-helix442-45514
α-helix467-4693
β-strand471-47992
β-strand484-49292
α-helix493-4953
α-helix514-53118
α-helix539-5413
α-helix543-5475
α-helix549-5524
β-strand557-56592
β-strand56813
α-helix569-5713
α-helix572-58514

Molecules and chains

MoleculeChainsTypeLengthOrganismUniProt
Kinesin-like protein KIF2CAprotein387Homo sapiensQ99661 (AlphaFold model)
Sequence of entity 1 (A), FASTA
>4Y05_1 Kinesin-like protein KIF2C (chains A)
MGRMKRAQEYDSSFPNWEFARMIKEFRATLECHPLTMTDPIEEHRICVCVRKRPLNKQEL
AKKEIDVISIPSKCLLLVHEKVDYLENQAFCFDFAFDETASNEVVYRFTAAPLVQTIFEG
GKATCFAYGQTGSGKTHTMGGDLSGKAQNASKGIYAMASADVFLLKNQPCYRKLGLEVYV
TFFEIYNGKLFDLLNKKAKLRVLEDGKQQVQVVGLQEHLVNSADDVIKMIDMGSACRTSG
QTFANSNSSRSHACFQIILRAKGRMHGKFSLVDLAGNERGADTSSADRQTRMEGAEINKS
LLALKECIRALGQNKAHTPFRESKLTQVLRDSFIGENSRTCMIATISPGISSCEYTLNTL
RYADRVKELSPHSGPSGEQLEHHHHHH

Ligands and cofactors

IDNameFormulaCopies
MGMagnesium ionMg1
ADPAdenosine-5'-diphosphateC10 H15 N5 O10 P21

Water and common crystallization additives (SO4) are not listed.

Primary citation

New Insights into the Coupling between Microtubule Depolymerization and ATP Hydrolysis by Kinesin-13 Protein Kif2C. Wang, W., Shen, T., Guerois, R. et al. J Biol Chem (2015) 290:18721-18731. DOI 10.1074/jbc.M115.646919 · PubMed

Other PDB entries of the same protein (UniProt Q99661 (AlphaFold model), which also has an AlphaFold model), best resolution first:

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