4ZUZ: SidC 1-871

SidC 1-871. Determined by X-ray diffraction at 2.86 Å resolution. Released 29 Jul 2015.

Method
X-ray diffraction
Resolution
2.86 Å
Organism
Legionella pneumophila
Chains
2
Atoms
14,094
Mol. weight
211.8 kDa
Released
29 Jul 2015

Explore 4ZUZ in 3D Show helices and sheets RCSB PDB PDBe

Secondary structure: helices and β-sheets

4ZUZ contains 89 α-helices and 50 β-strands across 2 chains. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.

Chain A: 44 helices, 25 β-strands

ElementResiduesLengthSheet
β-strand9-1241
β-strand21-2332
β-strand29-3132
β-strand32-3763
β-strand38-3924
β-strand41-4224
α-helix49-579
α-helix66-683
α-helix70-9223
α-helix100-12526
α-helix135-1384
α-helix146-1538
β-strand158-16254
β-strand17914
β-strand18515
α-helix187-1893
β-strand19715
α-helix203-2119
β-strand219-22026
α-helix227-2348
α-helix249-27123
β-strand28217
α-helix2871
β-strand28817
α-helix2891
α-helix291-2955
α-helix307-31812
β-strand338-33926
α-helix342-36524
α-helix373-3775
α-helix382-39615
α-helix400-41011
α-helix423-44018
β-strand448-45254
β-strand460-46343
β-strand466-47053
α-helix471-4788
α-helix486-4883
α-helix491-4966
β-strand50213
α-helix508-52922
α-helix533-5419
β-strand54318
β-strand54918
α-helix550-5534
α-helix556-5638
α-helix568-5769
α-helix583-59311
α-helix602-6043
β-strand605-60841
α-helix6151
β-strand61619
α-helix617-63620
α-helix650-67223
α-helix678-70225
α-helix709-72416
α-helix727-7293
β-strand73119
β-strand732-734310
β-strand739-741310
α-helix743-7508
α-helix755-7639
α-helix766-7694
α-helix771-7777
α-helix782-79413
α-helix806-83126
α-helix836-84510
α-helix851-8533
α-helix856-8627
Chain B: 45 helices, 25 β-strands
ElementResiduesLengthSheet
β-strand9-12411
β-strand21-23312
β-strand29-31312
β-strand32-37613
β-strand38-39214
β-strand41-42214
α-helix49-579
α-helix66-683
α-helix70-9223
α-helix100-12526
α-helix135-1384
α-helix146-1538
β-strand158-162514
β-strand179114
β-strand185115
α-helix187-1893
β-strand197115
α-helix203-2119
β-strand219-220216
α-helix227-2348
α-helix249-27123
β-strand282117
α-helix2871
β-strand288117
α-helix2891
α-helix291-2922
α-helix293-2975
α-helix307-31812
β-strand338-339216
α-helix342-36524
α-helix373-3775
α-helix382-39615
α-helix400-41011
α-helix423-44018
β-strand448-452514
β-strand460-463413
β-strand466-470513
α-helix471-4788
α-helix486-4883
α-helix491-4966
β-strand502113
α-helix508-52922
α-helix533-5419
β-strand543118
β-strand549118
α-helix550-5534
α-helix556-5638
α-helix568-5769
α-helix583-59311
α-helix602-6043
β-strand605-608411
α-helix6151
β-strand616119
α-helix617-63620
α-helix650-67223
α-helix678-70225
α-helix709-72416
α-helix727-7293
β-strand731119
β-strand732-734320
β-strand739-741320
α-helix743-7508
α-helix755-7639
α-helix766-7694
α-helix771-7777
α-helix782-79413
α-helix806-83126
α-helix836-84510
α-helix851-8533
α-helix856-8638

Molecules and chains

MoleculeChainsTypeLengthOrganismUniProt
SidCA, Bprotein917Legionella pneumophilaQ6RCR4 (AlphaFold model)
Sequence of entity 1 (A, B), FASTA
>4ZUZ_1 SidC (chains A, B)
MVINMVDVIKFKEPERCDYLYVDENNKVHILLPIVGGDEIGLDNTCQTAVELITFFYGSA
HSGVTKYSAEHQLSEYKRQLEEDIKAINSQKKISPHAYDDLLKEKIERLQQIEKYIELIQ
VLKKQYDEQNDIRQLRTGGIPQLPSGVKEIIKSSENAFAVRLSPYDNDKFTRFDDPLFNV
KRNISKYDTPSRQAPIPIYEGLGYRLRSTLFPEDKTPTPINKKSLRDKVKSTVLSHYKDE
DRIDGEKKDEKLNELITNLQNELVKELVKSDPQYSKLSLSKDPRGKEINYDYLVNSLMLV
DNDSEIGDWIDTILDATVDSTVWAVQASSPFYQGAKEISSDRDADKISIRVQYLLAEANI
YCKTNKLSDANFGEFFDKEPHATEIAKRVKEGFTQGADIEPIIYDYINSNHAELGLKSPL
TGKQQQEITDKFTKHYNTIKESPHFDEFFVADPDKKGNIFSHQGRISCHFLDFFTRQTKG
KHPLGDLASHQEALQEGTSNRLHHKNEVVAQGYEKLDQFKKEVVKLLAENKPKELLDYLV
ATSPTGVPNYSMLSKETQNYIAYNRNWPAIQKELEKATSIPESQKQDLSRLLSRDNLQHD
NLSAITWSKYSSKPLLDVELNKIAEGLELTAKIYNEKRGREWWFAGSRNEARKTQCEELQ
RVSKEINTLLQSESLTKSQVLEKVLNSIETLDKIDRDISAESNWFQSTLQKEVRLFRDQL
KDICQLDKYYFKSTKLDEIISLEMEEQFQKIQDPAVQQIVRDLPSHCHNDEAIEFFKTLN
PEEAAKVASYLSLEYREINKSTDKKTLLEQDIPRLFKEVNTQLLSKLKEEKAIDEQVHEK
LSQLADKIAPEHFTRNNIIKWSTNPEKLEESNLNEPIKSVQSPTTKQTSKQFREAMGEIT
GRNEPPTDTLYTGIIKK

Primary citation

Structure of the Legionella Virulence Factor, SidC Reveals a Unique PI(4)P-Specific Binding Domain Essential for Its Targeting to the Bacterial Phagosome. Luo, X., Wasilko, D.J., Liu, Y. et al. PLoS Pathog (2015) 11:e1004965-e1004965. DOI 10.1371/journal.ppat.1004965 · PubMed

Other PDB entries of the same protein (UniProt Q6RCR4 (AlphaFold model), which also has an AlphaFold model), best resolution first:

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