5JVS: PDB entry 5JVS

The neck-linker + DAL and alpha 7 helix of Drosophila melanogaster Kinesin-1 fused to EB1. Determined by X-ray diffraction at 2.25 Å resolution. Released 3 Aug 2016.

Method
X-ray diffraction
Resolution
2.25 Å
Organisms
Drosophila melanogaster, Homo sapiens
Chains
1
Atoms
597
Mol. weight
10.5 kDa
Ligands
ZN
Released
3 Aug 2016

Explore 5JVS in 3D Show helices and sheets RCSB PDB PDBe

Secondary structure: helices and β-sheets

5JVS contains 2 α-helices and 0 β-strands across 1 chain. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.

Chain A: 2 helices, 0 β-strands

ElementResiduesLengthSheet
α-helix16-6247
α-helix69-7810

Molecules and chains

MoleculeChainsTypeLengthOrganismUniProt
Chimera protein of Kinesin heavy chain and Microtubule-associated protein RP/EB family member 1Aprotein88Drosophila melanogaster, Homo sapiensP17210 (AlphaFold model), Q15691 (AlphaFold model)
Sequence of entity 1 (A), FASTA
>5JVS_1 Chimera protein of Kinesin heavy chain and Microtubule-associated protein RP/EB family member 1 (chains A)
LSKNVVAVNEELTDALAEEWKRRYEKEKEKNARLKGKVEDLEKERDFYFGKLRNIELICQ
ENEGENDPVLQRIVDILYATDEGFVIPD

Ligands and cofactors

IDNameFormulaCopies
ZNZinc ionZn1

Water and common crystallization additives (EDO) are not listed.

Primary citation

Family-specific Kinesin Structures Reveal Neck-linker Length Based on Initiation of the Coiled-coil. Phillips, R.K., Peter, L.G., Gilbert, S.P. et al. J Biol Chem (2016) 291:20372-20386. DOI 10.1074/jbc.M116.737577 · PubMed

Other PDB entries of the same protein (UniProt P17210 (AlphaFold model), which also has an AlphaFold model), best resolution first:

Browse structure collections

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