PanDDA analysis group deposition -- Crystal Structure of FIBRINOGEN-LIKE GLOBE DOMAIN OF HUMAN TENASCIN-C in complex with Z509756472. Determined by X-ray diffraction at 1.57 Å resolution. Released 28 Oct 2020.
Explore 5R5Y in 3D Show helices and sheets RCSB PDB PDBe
5R5Y contains 11 α-helices and 13 β-strands across 1 chain. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.
| Element | Residues | Length | Sheet |
|---|---|---|---|
| α-helix | 1984-1989 | 6 | |
| β-strand | 1996-2001 | 6 | 1 |
| α-helix | 2002-2004 | 3 | |
| β-strand | 2009-2015 | 7 | 1 |
| α-helix | 2018-2020 | 3 | |
| β-strand | 2023-2029 | 7 | 1 |
| α-helix | 2040-2045 | 6 | |
| β-strand | 2047-2048 | 2 | 1 |
| β-strand | 2054-2055 | 2 | 1 |
| α-helix | 2058-2065 | 8 | |
| β-strand | 2070-2078 | 9 | 1 |
| β-strand | 2081-2092 | 12 | 1 |
| α-helix | 2095-2097 | 3 | |
| β-strand | 2101-2108 | 8 | 1 |
| α-helix | 2115-2117 | 3 | |
| α-helix | 2120-2122 | 3 | |
| β-strand | 2123 | 1 | 2 |
| α-helix | 2136-2140 | 5 | |
| β-strand | 2144 | 1 | 2 |
| β-strand | 2152-2153 | 2 | 3 |
| β-strand | 2168-2169 | 2 | 3 |
| α-helix | 2170-2173 | 4 | |
| β-strand | 2181-2188 | 8 | 1 |
| α-helix | 2189-2193 | 5 |
| Molecule | Chains | Type | Length | Organism | UniProt |
|---|---|---|---|---|---|
| Tenascin C (Hexabrachion), isoform CRA_a | A | protein | 220 | Homo sapiens | P24821 (AlphaFold model) |
>5R5Y_1 Tenascin C (Hexabrachion), isoform CRA_a (chains A) SMPFPKDCSQAMLNGDTTSGLYTIYLNGDKAQALEVFCDMTSDGGGWIVFLRRKNGRENF YQNWKAYAAGFGDRREEFWLGLDNLNKITAQGQYELRVDLRDHGETAFAVYDKFSVGDAK TRYKLKVEGYSGTAGDSMAYHNGRSFSTFDKDTDSAITNCALSYKGAFWYRNCHRVNLMG RYGDNNHSQGVNWFHWKGHEHSIQFAEMKLRPSNFRNLEG
| ID | Name | Formula | Copies |
|---|---|---|---|
| JGG | N-[(4-cyanophenyl)methyl]morpholine-4-carboxamide | C13 H15 N3 O2 | 1 |
PanDDA analysis group deposition. Coker, J.A., Bezerra, G.A., von Delft, F. et al. To be published.
Other PDB entries of the same protein (UniProt P24821 (AlphaFold model), which also has an AlphaFold model), best resolution first:
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