OdinProfilin/Rabbit Actin Complex. Determined by X-ray diffraction at 1.53 Å resolution. Released 10 Oct 2018.
Explore 5ZZA in 3D Show helices and sheets RCSB PDB PDBe
5ZZA contains 26 α-helices and 26 β-strands across 2 chains. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.
| Element | Residues | Length | Sheet |
|---|---|---|---|
| α-helix | 6-7 | 2 | |
| β-strand | 8-12 | 5 | 2 |
| β-strand | 16-21 | 6 | 2 |
| β-strand | 29-32 | 4 | 2 |
| β-strand | 35-38 | 4 | 3 |
| β-strand | 53-54 | 2 | 3 |
| α-helix | 56-60 | 5 | |
| β-strand | 65-68 | 4 | 3 |
| β-strand | 71-72 | 2 | 4 |
| β-strand | 75-76 | 2 | 4 |
| α-helix | 79-88 | 10 | |
| α-helix | 89-94 | 6 | |
| α-helix | 98-100 | 3 | |
| β-strand | 103-107 | 5 | 2 |
| α-helix | 113-121 | 9 | |
| α-helix | 122-126 | 5 | |
| β-strand | 131-136 | 6 | 2 |
| α-helix | 137-144 | 8 | |
| β-strand | 150-155 | 6 | 5 |
| β-strand | 160-166 | 7 | 5 |
| β-strand | 169-170 | 2 | 5 |
| α-helix | 171 | 1 | |
| β-strand | 176-178 | 3 | 5 |
| α-helix | 182-195 | 14 | |
| α-helix | 203-216 | 14 | |
| α-helix | 223-232 | 10 | |
| β-strand | 238-241 | 4 | 6 |
| β-strand | 247-250 | 4 | 6 |
| α-helix | 253-259 | 7 | |
| α-helix | 264-267 | 4 | |
| α-helix | 272-273 | 2 | |
| α-helix | 274-283 | 10 | |
| α-helix | 290-294 | 5 | |
| β-strand | 297-300 | 4 | 5 |
| α-helix | 302-304 | 3 | |
| α-helix | 309-320 | 12 | |
| β-strand | 329-330 | 2 | 5 |
| α-helix | 338-347 | 10 | |
| α-helix | 350-355 | 6 | |
| β-strand | 357-358 | 2 | 2 |
| α-helix | 359-365 | 7 | |
| α-helix | 369-373 | 5 |
| Element | Residues | Length | Sheet |
|---|---|---|---|
| α-helix | 3-9 | 7 | |
| β-strand | 15-22 | 8 | 1 |
| β-strand | 27-30 | 4 | 1 |
| α-helix | 38-47 | 10 | |
| β-strand | 51-54 | 4 | 1 |
| β-strand | 57-64 | 8 | 1 |
| β-strand | 68-73 | 6 | 1 |
| β-strand | 78-85 | 8 | 1 |
| β-strand | 89-95 | 7 | 1 |
| α-helix | 101-116 | 16 |
| Molecule | Chains | Type | Length | Organism | UniProt |
|---|---|---|---|---|---|
| Uncharacterized protein | P | protein | 121 | Candidatus Odinarchaeota archaeon LCB_4 | A0A1Q9N7W7 (AlphaFold model) |
| Actin, alpha skeletal muscle | A | protein | 373 | Oryctolagus cuniculus | P68135 (AlphaFold model) |
>5ZZA_1 Uncharacterized protein (chains P) GPMSLEQLAGRLISGDIGATAVIKMTGEIIYQSPNWSVDGVHAINVYKNREPSIIIQGVK YSVIDVNEDRLIATNVGGQGHIVGAVAGGKALLIGYVSPNGDARTAYIQIDKTARQLSKI L
>5ZZA_2 Actin, alpha skeletal muscle (chains A) DETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR GILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQI MFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAG RDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYEL PDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGG TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEY DEAGPSIVHRKCF
| ID | Name | Formula | Copies |
|---|---|---|---|
| CA | Calcium ion | Ca | 1 |
| ATP | Adenosine-5'-triphosphate | C10 H16 N5 O13 P3 | 1 |
| LAB | Latrunculin B | C20 H29 N O5 S | 2 |
Genomes of Asgard archaea encode profilins that regulate actin. Akil, C., Robinson, R.C. Nature (2018) 562:439-443. DOI 10.1038/s41586-018-0548-6 · PubMed
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