6B7H: MGluR3 with an agonist

Structure of mGluR3 with an agonist. Determined by X-ray diffraction at 2.82 Å resolution. Released 25 Apr 2018.

Method
X-ray diffraction
Resolution
2.82 Å
Organism
Homo sapiens
Chains
1
Atoms
3,567
Mol. weight
60.22 kDa
Ligands
CA, CWY, NAG
Released
25 Apr 2018

Explore 6B7H in 3D Show helices and sheets RCSB PDB PDBe

Secondary structure: helices and β-sheets

6B7H contains 21 α-helices and 20 β-strands across 1 chain. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.

Chain A: 21 helices, 20 β-strands

ElementResiduesLengthSheet
β-strand33-3421
β-strand39-4571
β-strand48-4922
β-strand59-6022
α-helix62-676
α-helix68-7912
β-strand91-9771
α-helix102-1098
α-helix110-1123
β-strand142-14651
α-helix151-16212
β-strand168-17031
α-helix176-1794
β-strand187-18931
α-helix194-20714
β-strand212-21873
α-helix223-23614
β-strand240-24783
α-helix254-2552
α-helix256-2649
β-strand271-27553
α-helix278-28912
β-strand296-29943
α-helix307-3104
α-helix314-3174
β-strand321-32553
α-helix331-3399
α-helix351-3588
β-strand36214
β-strand37214
α-helix390-41122
α-helix420-4223
α-helix427-4293
α-helix430-4356
β-strand438-44035
β-strand453-45535
β-strand466-47383
β-strand478-48693
β-strand490-49233
α-helix494-4963
α-helix503-5053

Molecules and chains

MoleculeChainsTypeLengthOrganismUniProt
Metabotropic glutamate receptor 3Aprotein517Homo sapiensQ14832 (AlphaFold model)
Sequence of entity 1 (A), FASTA
>6B7H_1 Metabotropic glutamate receptor 3 (chains A)
MALKMLTRLQVLTLALFSKGFLLSLGDHNFLRREIKIEGDLVLGGLFPINEKGTGTEECG
RINEDRGIQRLEAMLFAIDEINKDDYLLPGVKLGVHILDTCSRDTYALEQSLEFVRASLT
KVDEAEYMCPDGSYAIQENIPLLIAGVIGGSYSSVSIQVANLLRLFQIPQISYASTSAKL
SDKSRYDYFARTVPPDFYQAKAMAEILRFFNWTYVSTVASEGDYGETGIEAFEQEARLRN
ISIATAEKVGRSNIRKSYDSVIRELLQKPNARVVVLFMRSDDSRELIAAASRANASFTWV
ASDGWGAQESIIKGSEHVAYGAITLELASQPVRQFDRYFQSLNPYNNHRNPWFRDFWEQK
FQCSLQNKRNHRRVCDKHLAIDSSNYEQESKIMFVVNAVYAMAHALHKMQRTLCPNTTKL
CDAMKILDGKKLYKDYLLKINFTAPFNPNKDADSIVKFDTFGDGMGRYNVFNFQNVGGKY
SYLKVGHWAETLSLDVNSIHWSRNSVPTSEGHHHHHH

Ligands and cofactors

IDNameFormulaCopies
CACalcium ionCa1
CWY(1S,2S,4S,5R,6S)-2-amino-4-[(3-methoxybenzene-1-carbonyl)amino]bicyclo[3.1.0]he…C16 H18 N2 O61
NAG2-acetamido-2-deoxy-beta-D-glucopyranoseC8 H15 N O61

Primary citation

Synthesis and Pharmacological Characterization of C4beta-Amide-Substituted 2-Aminobicyclo[3.1.0]hexane-2,6-dicarboxylates. Identification of (1 S,2 S,4 S,5 R,6 S)-2-Amino-4-[(3-methoxybenzoyl)amino]bicyclo[3.1.0]hexane-2,6-dicarboxylic Acid (LY2794193), a Highly Potent and Selective mGlu3Receptor…. Monn, J.A., Henry, S.S., Massey, S.M. et al. J Med Chem (2018) 61:2303-2328. DOI 10.1021/acs.jmedchem.7b01481 · PubMed

Other PDB entries of the same protein (UniProt Q14832 (AlphaFold model), which also has an AlphaFold model), best resolution first:

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