6MSB: 26S proteasome non-ATPase regulatory subunit 1
Cryo-EM structures and dynamics of substrate-engaged human 26S proteasome. Determined by electron microscopy at 3.0 Å resolution. Released 5 Dec 2018.
- Method
- Electron microscopy
- Resolution
- 3.0 Å
- Organism
- Homo sapiens
- Chains
- 48
- Atoms
- 104,938
- Mol. weight
- 1681.81 kDa
- Ligands
- ZN, ATP, ADP, MG
- Released
- 5 Dec 2018
Explore 6MSB in 3D
Show helices and sheets
RCSB PDB
PDBe
Secondary structure: helices and β-sheets
6MSB contains 607 α-helices and 547 β-strands across 48 chains. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.
Chain a: 21 helices, 4 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 5-10 | 6 | |
| α-helix | 20-28 | 9 | |
| α-helix | 29-31 | 3 | |
| α-helix | 38-41 | 4 | |
| α-helix | 43-46 | 4 | |
| α-helix | 52-55 | 4 | |
| α-helix | 57-66 | 10 | |
| α-helix | 74-87 | 14 | |
| α-helix | 90-103 | 14 | |
| α-helix | 111-121 | 11 | |
| α-helix | 130-137 | 8 | |
| α-helix | 149-164 | 16 | |
| α-helix | 170-179 | 10 | |
| α-helix | 190-206 | 17 | |
| α-helix | 224-226 | 3 | |
| α-helix | 231-241 | 11 | |
| α-helix | 245-250 | 6 | |
| α-helix | 265-283 | 19 | |
| β-strand | 292 | 1 | 40 |
| α-helix | 293-299 | 7 | |
| α-helix | 304-317 | 14 | |
| β-strand | 320-325 | 6 | 15 |
| β-strand | 330 | 1 | 40 |
| β-strand | 331-336 | 6 | 15 |
| α-helix | 345-370 | 26 | |
Chain A: 14 helices, 16 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 42-60 | 19 | |
| α-helix | 79-81 | 3 | |
| β-strand | 97-98 | 2 | 69 |
| β-strand | 100-103 | 4 | 70 |
| β-strand | 111-114 | 4 | 70 |
| β-strand | 122-123 | 2 | 70 |
| β-strand | 124 | 1 | 71 |
| β-strand | 140-142 | 3 | 69 |
| β-strand | 148 | 1 | 71 |
| β-strand | 149-152 | 4 | 69 |
| β-strand | 165 | 1 | 72 |
| α-helix | 174-176 | 3 | |
| α-helix | 181-191 | 11 | |
| α-helix | 193-196 | 4 | |
| β-strand | 212-215 | 4 | 72 |
| α-helix | 222-232 | 11 | |
| β-strand | 236-241 | 6 | 72 |
| α-helix | 242-244 | 3 | |
| α-helix | 252-266 | 15 | |
| β-strand | 270-275 | 6 | 72 |
| α-helix | 293-304 | 12 | |
| β-strand | 315-321 | 7 | 72 |
| α-helix | 324-326 | 3 | |
| β-strand | 339-342 | 4 | 72 |
| α-helix | 349-358 | 10 | |
| β-strand | 364 | 1 | 73 |
| α-helix | 371-374 | 4 | |
| α-helix | 382-398 | 17 | |
| β-strand | 404 | 1 | 73 |
| α-helix | 406-416 | 11 | |
Chain b: 7 helices, 5 β-strands
| Element | Residues | Length | Sheet |
|---|
| β-strand | 4-10 | 7 | 45 |
| α-helix | 25-43 | 19 | |
| β-strand | 51-53 | 3 | 45 |
| α-helix | 69-74 | 6 | |
| α-helix | 89-98 | 10 | |
| β-strand | 106-113 | 8 | 45 |
| α-helix | 121-132 | 12 | |
| β-strand | 137-142 | 6 | 45 |
| α-helix | 154-158 | 5 | |
| β-strand | 170-171 | 2 | 45 |
| α-helix | 172-174 | 3 | |
| α-helix | 185-189 | 5 | |
Chain B: 18 helices, 19 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 59-85 | 27 | |
| α-helix | 94-102 | 9 | |
| β-strand | 107-108 | 2 | 76 |
| β-strand | 109-112 | 4 | 77 |
| β-strand | 116 | 1 | 78 |
| β-strand | 120 | 1 | 78 |
| β-strand | 123-124 | 2 | 77 |
| β-strand | 130-131 | 2 | 77 |
| β-strand | 134 | 1 | 78 |
| β-strand | 135 | 1 | 79 |
| β-strand | 149-151 | 3 | 77 |
| β-strand | 159 | 1 | 79 |
| β-strand | 161-162 | 2 | 77 |
| α-helix | 171-174 | 4 | |
| β-strand | 175 | 1 | 80 |
| α-helix | 184-186 | 3 | |
| α-helix | 193-197 | 5 | |
| α-helix | 198-202 | 5 | |
| α-helix | 203-206 | 4 | |
| α-helix | 210-214 | 5 | |
| β-strand | 221-225 | 5 | 80 |
| α-helix | 232-242 | 11 | |
| β-strand | 246-251 | 6 | 80 |
| α-helix | 253-255 | 3 | |
| α-helix | 262-275 | 14 | |
| β-strand | 280-285 | 6 | 80 |
| α-helix | 288-290 | 3 | |
| α-helix | 302-316 | 15 | |
| β-strand | 325-331 | 7 | 80 |
| β-strand | 349-352 | 4 | 80 |
| α-helix | 354-357 | 4 | |
| α-helix | 361-368 | 8 | |
| β-strand | 374 | 1 | 81 |
| α-helix | 380-384 | 5 | |
| α-helix | 392-408 | 17 | |
| β-strand | 414 | 1 | 81 |
| α-helix | 416-426 | 11 | |
Chain c: 14 helices, 8 β-strands
| Element | Residues | Length | Sheet |
|---|
| β-strand | 31-32 | 2 | 49 |
| α-helix | 37-47 | 11 | |
| β-strand | 54-60 | 7 | 49 |
| β-strand | 67-74 | 8 | 49 |
| α-helix | 75-76 | 2 | |
| α-helix | 89-96 | 8 | |
| β-strand | 107-114 | 8 | 49 |
| α-helix | 124-131 | 8 | |
| α-helix | 140 | 1 | |
| β-strand | 141-145 | 5 | 49 |
| β-strand | 160-162 | 3 | 49 |
| α-helix | 166-170 | 5 | |
| α-helix | 186-188 | 3 | |
| α-helix | 189-193 | 5 | |
| β-strand | 200-202 | 3 | 49 |
| β-strand | 205-206 | 2 | 49 |
| α-helix | 211-218 | 8 | |
| α-helix | 234-243 | 10 | |
| α-helix | 245-255 | 11 | |
| α-helix | 269-272 | 4 | |
| α-helix | 273-275 | 3 | |
| α-helix | 280-308 | 29 | |
Chain C: 23 helices, 15 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 20-23 | 4 | |
| α-helix | 25-65 | 41 | |
| α-helix | 69-70 | 2 | |
| β-strand | 71-73 | 3 | 84 |
| β-strand | 75-80 | 6 | 76 |
| β-strand | 84-89 | 6 | 76 |
| β-strand | 92-98 | 7 | 76 |
| β-strand | 112 | 1 | 76 |
| β-strand | 113-116 | 4 | 84 |
| β-strand | 122 | 1 | 76 |
| β-strand | 123-127 | 5 | 84 |
| α-helix | 133-141 | 9 | |
| α-helix | 148-150 | 3 | |
| α-helix | 155-161 | 7 | |
| α-helix | 162-166 | 5 | |
| α-helix | 167-170 | 4 | |
| α-helix | 173-176 | 4 | |
| α-helix | 181-183 | 3 | |
| β-strand | 185-189 | 5 | 85 |
| α-helix | 196-206 | 11 | |
| β-strand | 210-214 | 5 | 85 |
| α-helix | 221-224 | 4 | |
| α-helix | 232-234 | 3 | |
| α-helix | 235-238 | 4 | |
| β-strand | 244-248 | 5 | 85 |
| α-helix | 268-279 | 12 | |
| β-strand | 289-294 | 6 | 85 |
| α-helix | 298-300 | 3 | |
| β-strand | 313-316 | 4 | 85 |
| α-helix | 318-320 | 3 | |
| α-helix | 322-332 | 11 | |
| α-helix | 333-335 | 3 | |
| β-strand | 338 | 1 | 86 |
| α-helix | 339 | 1 | |
| α-helix | 344-348 | 5 | |
| α-helix | 358-372 | 15 | |
| β-strand | 378 | 1 | 86 |
| α-helix | 380-394 | 15 | |
Chain d: 11 helices, 2 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 19-32 | 14 | |
| α-helix | 49-64 | 16 | |
| α-helix | 71-79 | 9 | |
| α-helix | 96-108 | 13 | |
| α-helix | 112-116 | 5 | |
| α-helix | 118-120 | 3 | |
| α-helix | 131-144 | 14 | |
| α-helix | 149-153 | 5 | |
| α-helix | 164-181 | 18 | |
| α-helix | 205-212 | 8 | |
| β-strand | 217 | 1 | 55 |
| β-strand | 222 | 1 | 55 |
| α-helix | 236-251 | 16 | |
Chain D: 19 helices, 11 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 42-67 | 26 | |
| α-helix | 69-78 | 10 | |
| α-helix | 79-83 | 5 | |
| β-strand | 87-91 | 5 | 90 |
| β-strand | 92-97 | 6 | 84 |
| β-strand | 100-104 | 5 | 84 |
| β-strand | 110-114 | 5 | 84 |
| α-helix | 121-123 | 3 | |
| β-strand | 129-132 | 4 | 90 |
| β-strand | 139-142 | 4 | 90 |
| α-helix | 164-166 | 3 | |
| α-helix | 171-181 | 11 | |
| α-helix | 183-186 | 4 | |
| α-helix | 188-190 | 3 | |
| α-helix | 191-195 | 5 | |
| β-strand | 201-205 | 5 | 91 |
| α-helix | 212-219 | 8 | |
| β-strand | 227-231 | 5 | 91 |
| α-helix | 242-256 | 15 | |
| β-strand | 261-265 | 5 | 91 |
| α-helix | 267-269 | 3 | |
| α-helix | 281-295 | 15 | |
| β-strand | 306-310 | 5 | 91 |
| β-strand | 329-332 | 4 | 91 |
| α-helix | 334-336 | 3 | |
| α-helix | 341-349 | 9 | |
| α-helix | 361-364 | 4 | |
| α-helix | 374-388 | 15 | |
| α-helix | 396-406 | 11 | |
| α-helix | 415-417 | 3 | |
29 more chain groups are not listed. Open the entry in the viewer and use the sequence panel to see them.
Molecules and chains
| Molecule | Chains | Type | Length | Organism | UniProt |
|---|
| 26S proteasome non-ATPase regulatory subunit 1 | U | protein | 953 | Homo sapiens | Q99460 (AlphaFold model) |
| 26S proteasome non-ATPase regulatory subunit 3 | V | protein | 534 | Homo sapiens | O43242 (AlphaFold model) |
| 26S proteasome non-ATPase regulatory subunit 12 | W | protein | 456 | Homo sapiens | O00232 (AlphaFold model) |
| 26S proteasome non-ATPase regulatory subunit 11 | X | protein | 422 | Homo sapiens | O00231 (AlphaFold model) |
| 26S proteasome non-ATPase regulatory subunit 6 | Y | protein | 389 | Homo sapiens | Q15008 |
| 26S proteasome non-ATPase regulatory subunit 7 | Z | protein | 324 | Homo sapiens | P51665 |
| 26S proteasome non-ATPase regulatory subunit 13 | a | protein | 376 | Homo sapiens | Q9UNM6 |
| 26S proteasome non-ATPase regulatory subunit 4 | b | protein | 377 | Homo sapiens | P55036 |
| 26S proteasome non-ATPase regulatory subunit 14 | c | protein | 309 | Homo sapiens | O00487 |
| 26S proteasome non-ATPase regulatory subunit 8 | d | protein | 349 | Homo sapiens | P48556 |
| 26S proteasome complex subunit SEM1 | e | protein | 70 | Homo sapiens | P60896 |
| 26S proteasome non-ATPase regulatory subunit 2 | f | protein | 908 | Homo sapiens | Q13200 |
21 more molecules are not listed.
Sequence of entity 1 (U), FASTA
>6MSB_1 26S proteasome non-ATPase regulatory subunit 1 (chains U)
MITSAAGIISLLDEDEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGFRSRQFA
ALVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAKCIDHYTKQCVENADLPE
GEKKPIDQRLEGIVNKMFQRCLDDHKYKQAIGIALETRRLDVFEKTILESNDVPGMLAYS
LKLCMSLMQNKQFRNKVLRVLVKIYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVKED
NLLMAYQICFDLYESASQQFLSSVIQNLRTVGTPIASVPGSTNTGTVPGSEKDSDSMETE
EKTSSAFVGKTPEASPEPKDQTLKMIKILSGEMAIELHLQFLIRNNNTDLMILKNTKDAV
RNSVCHTATVIANSFMHCGTTSDQFLRDNLEWLARATNWAKFTATASLGVIHKGHEKEAL
QLMATYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLNQLKNASNDIVRHGGSLG
LGLAAMGTARQDVYDLLKTNLYQDDAVTGEAAGLALGLVMLGSKNAQAIEDMVGYAQETQ
HEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPILRRSGMYTVAMAYCGSGNNKAIR
RLLHVAVSDVNDDVRRAAVESLGFILFRTPEQCPSVVSLLSESYNPHVRYGAAMALGICC
AGTGNKEAINLLEPMTNDPVNYVRQGALIASALIMIQQTEITCPKVNQFRQLYSKVINDK
HDDVMAKFGAILAQGILDAGGHNVTISLQSRTGHTHMPSVVGVLVFTQFWFWFPLSHFLS
LAYTPTCVIGLNKDLKMPKVQYKSNCKPSTFAYPAPLEVPKEKEKEKVSTAVLSITAKAK
KKEKEKEKKEEEKMEVDEAEKKEEKEKKKEPEPNFQLLDNPARVMPAQLKVLTMPETCRY
QPFKPLSIGGIIILKDTSEDIEELVEPVAAHGPKIEEEEQEPEPPEPFEYIDD
Sequence of entity 2 (V), FASTA
>6MSB_2 26S proteasome non-ATPase regulatory subunit 3 (chains V)
MKQEGSARRRGADKAKPPPGGGEQEPPPPPAPQDVEMKEEAATGGGSTGEADGKTAAAAA
EHSQRELDTVTLEDIKEHVKQLEKAVSGKEPRFVLRALRMLPSTSRRLNHYVLYKAVQGF
FTSNNATRDFLLPFLEEPMDTEADLQFRPRTGKAASTPLLPEVEAYLQLLVVIFMMNSKR
YKEAQKISDDLMQKISTQNRRALDLVAAKCYYYHARVYEFLDKLDVVRSFLHARLRTATL
RHDADGQATLLNLLLRNYLHYSLYDQAEKLVSKSVFPEQANNNEWARYLYYTGRIKAIQL
EYSEARRTMTNALRKAPQHTAVGFKQTVHKLLIVVELLLGEIPDRLQFRQPSLKRSLMPY
FLLTQAVRTGNLAKFNQVLDQFGEKFQADGTYTLIIRLRHNVIKTGVRMISLSYSRISLA
DIAQKLQLDSPEDAEFIVAKAIRDGVIEASINHEKGYVQSKEMIDIYSTREPQLAFHQRI
SFCLDIHNMSVKAMRFPPKSYNKDLESAEERREREQQDLEFAKEMAEDDDDSFP
Sequence of entity 3 (W), FASTA
>6MSB_3 26S proteasome non-ATPase regulatory subunit 12 (chains W)
MADGGSERADGRIVKMEVDYSATVDQRLPECAKLAKEGRLQEVIETLLSLEKQTRTASDM
VSTSRILVAVVKMCYEAKEWDLLNENIMLLSKRRSQLKQAVAKMVQQCCTYVEEITDLPI
KLRLIDTLRMVTEGKIYVEIERARLTKTLATIKEQNGDVKEAASILQELQVETYGSMEKK
ERVEFILEQMRLCLAVKDYIRTQIISKKINTKFFQEENTEKLKLKYYNLMIQLDQHEGSY
LSICKHYRAIYDTPCIQAESEKWQQALKSVVLYVILAPFDNEQSDLVHRISGDKKLEEIP
KYKDLLKLFTTMELMRWSTLVEDYGMELRKGSLESPATDVFGSTEEGEKRWKDLKNRVVE
HNIRIMAKYYTRITMKRMAQLLDLSVDESEAFLSNLVVNKTIFAKVDRLAGIINFQRPKD
PNNLLNDWSQKLNSLMSLVNKTTHLIAKEEMIHNLQ
Sequence of entity 4 (X), FASTA
>6MSB_4 26S proteasome non-ATPase regulatory subunit 11 (chains X)
MAAAAVVEFQRAQSLLSTDREASIDILHSIVKRDIQENDEEAVQVKEQSILELGSLLAKT
GQAAELGGLLKYVRPFLNSISKAKAARLVRSLLDLFLDMEAATGQEVELCLECIEWAKSE
KRTFLRQALEARLVSLYFDTKRYQEALHLGSQLLRELKKMDDKALLVEVQLLESKTYHAL
SNLPKARAALTSARTTANAIYCPPKLQATLDMQSGIIHAAEEKDWKTAYSYFYEAFEGYD
SIDSPKAITSLKYMLLCKIMLNTPEDVQALVSGKLALRYAGRQTEALKCVAQASKNRSLA
DFEKALTDYRAELRDDPIISTHLAKLYDNLLEQNLIRVIEPFSRVQIEHISSLIKLSKAD
VERKLSQMILDKKFHGILDQGEGVLIIFDEPPVDKTYEAALETIQNMSKVVDSLYNKAKK
LT
Sequence of entity 5 (Y), FASTA
>6MSB_5 26S proteasome non-ATPase regulatory subunit 6 (chains Y)
MPLENLEEEGLPKNPDLRIAQLRFLLSLPEHRGDAAVRDELMAAVRDNNMAPYYEALCKS
LDWQIDVDLLNKMKKANEDELKRLDEELEDAEKNLGESEIRDAMMAKAEYLCRIGDKEGA
LTAFRKTYDKTVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKSLIEEGGDWDRRNRL
KVYQGLYCVAIRDFKQAAELFLDTVSTFTSYELMDYKTFVTYTVYVSMIALERPDLREKV
IKGAEILEVLHSLPAVRQYLFSLYECRYSVFFQSLAVVEQEMKKDWLFAPHYRYYVREMR
IHAYSQLLESYRSLTLGYMAEAFGVGVEFIDQELSRFIAAGRLHCKIDKVNEIVETNRPD
SKNWQYQETIKKGDLLLNRVQKLSRVINM
Sequence of entity 6 (Z), FASTA
>6MSB_6 26S proteasome non-ATPase regulatory subunit 7 (chains Z)
MPELAVQKVVVHPLVLLSVVDHFNRIGKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDE
DDKDDSVWFLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRYCPNSV
LVIIDVKPKDLGLPTEAYISVEEVHDDGTPTSKTFEHVTSEIGAEEAEEVGVEHLLRDIK
DTTVGTLSQRITNQVHGLKGLNSKLLDIRSYLEKVATGKLPINHQIIYQLQDVFNLLPDV
SLQEFVKAFYLKTNDQMVVVYLASLIRSVVALHNLINNKIANRDAEKKEGQEKEESKKDR
KEDKEKDKDKEKSDVKKEEKKEKK
Sequence of entity 7 (a), FASTA
>6MSB_7 26S proteasome non-ATPase regulatory subunit 13 (chains a)
MKDVPGFLQQSQNSGPGQPAVWHRLEELYTKKLWHQLTLQVLDFVQDPCFAQGDGLIKLY
ENFISEFEHRVNPLSLVEIILHVVRQMTDPNVALTFLEKTREKVKSSDEAVILCKTAIGA
LKLNIGDLQVTKETIEDVEEMLNNLPGVTSVHSRFYDLSSKYYQTIGNHASYYKDALRFL
GCVDIKDLPVSEQQERAFTLGLAGLLGEGVFNFGELLMHPVLESLRNTDRQWLIDTLYAF
NSGNVERFQTLKTAWGQQPDLAANEAQLLRKIQLLCLMEMTFTRPANHRQLTFEEIAKSA
KITVNEVELLVMKALSVGLVKGSIDEVDKRVHMTWVQPRVLDLQQIKGMKDRLEFWCTDV
KSMEMLVEHQAHDILT
Sequence of entity 8 (b), FASTA
>6MSB_8 26S proteasome non-ATPase regulatory subunit 4 (chains b)
MVLESTMVCVDNSEYMRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENNVGLITLANDCEV
LTTLTPDTGRILSKLHTVQPKGKITFCTGIRVAHLALKHRQGKNHKMRIIAFVGSPVEDN
EKDLVKLAKRLKKEKVNVDIINFGEEEVNTEKLTAFVNTLNGKDGTGSHLVTVPPGPSLA
DALISSPILAGEGGAMLGLGASDFEFGVDPSADPELALALRVSMEEQRQRQEEEARRAAA
ASAAEAGIATTGTEDSDDALLKMTISQQEFGRTGLPDLSSMTEEEQIAYAMQMSLQGAEF
GQAESADIDASSAMDTSEPAKEEDDYDVMQDPEFLQSVLENLPGVDPNNEAIRNAMGSLA
SQATKDGKKDKKEEDKK
Sequence of entity 9 (c), FASTA
>6MSB_9 26S proteasome non-ATPase regulatory subunit 14 (chains c)
DRLLRLGGGMPGLGQGPPTDAPAVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEF
VDDYTVRVIDVFAMPQSGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCW
LSGVDINTQQSFEALSERAVAVVVDPIQSVKGKVVIDAFRLINANMMVLGHEPRQTTSNL
GHLNKPSIQALIHGLNRHYYSITINYRKNELEQKMLLNLHKKSWMEGLTLQDYSEHCKHN
ESVVKEMLELAKNYNKAVEEEDKMTPEQLAIKNVGKQDPKRHLEEHVDVLMTSNIVQCLA
AMLDTVVFK
Sequence of entity 10 (d), FASTA
>6MSB_10 26S proteasome non-ATPase regulatory subunit 8 (chains d)
FIKGRAPRAPPRERRRATRGGLRQVVAPPRALGSTSRPHFRRASVCRRRCRKSGGLLAAS
RKMAAAAVNGAAGFSSSGPAATSGAVLQAATGMYEQLKGEWNRKSPNLSKCGEELGRLKL
VLLELNFLPTTGTKLTKQQLILARDILEIGAQWSILRKDIPSFERYMAQLKCYYFDYKEQ
LPESAYMHQLLGLNLLFLLSQNRVAEFHTELERLPAKDIQTNVYIKHPVSLEQYLMEGSY
NKVFLAKGNIPAESYTFFIDILLDTIRDEIAGCIEKAYEKILFTEATRILFFNTPKKMTD
YAKKRGWVLGPNNYYSFASQQQKPEDTTIPSTELAKQVIEYARQLEMIV
Sequence of entity 11 (e), FASTA
>6MSB_11 26S proteasome complex subunit SEM1 (chains e)
MSEKKQPVDLGLLEEDDEFEEFPAEDWAGLDEDEDAHVWEDNWDDDNVEDDFSNQLRAEL
EKHGYKMETS
Sequence of entity 12 (f), FASTA
>6MSB_12 26S proteasome non-ATPase regulatory subunit 2 (chains f)
MEEGGRDKAPVQPQQSPAAAPGGTDEKPSGKERRDAGDKDKEQELSEEDKQLQDELEMLV
ERLGEKDTSLYRPALEELRRQIRSSTTSMTSVPKPLKFLRPHYGKLKEIYENMAPGENKR
FAADIISVLAMTMSGERECLKYRLVGSQEELASWGHEYVRHLAGEVAKEWQELDDAEKVQ
REPLLTLVKEIVPYNMAHNAEHEACDLLMEIEQVDMLEKDIDENAYAKVCLYLTSCVNYV
PEPENSALLRCALGVFRKFSRFPEALRLALMLNDMELVEDIFTSCKDVVVQKQMAFMLGR
HGVFLELSEDVEEYEDLTEIMSNVQLNSNFLALARELDIMEPKVPDDIYKTHLENNRFGG
SGSQVDSARMNLASSFVNGFVNAAFGQDKLLTDDGNKWLYKNKDHGMLSAAASLGMILLW
DVDGGLTQIDKYLYSSEDYIKSGALLACGIVNSGVRNECDPALALLSDYVLHNSNTMRLG
SIFGLGLAYAGSNREDVLTLLLPVMGDSKSSMEVAGVTALACGMIAVGSCNGDVTSTILQ
TIMEKSETELKDTYARWLPLGLGLNHLGKGEAIEAILAALEVVSEPFRSFANTLVDVCAY
AGSGNVLKVQQLLHICSEHFDSKEKEEDKDKKEKKDKDKKEAPADMGAHQGVAVLGIALI
AMGEEIGAEMALRTFGHLLRYGEPTLRRAVPLALALISVSNPRLNILDTLSKFSHDADPE
VSYNSIFAMGMVGSGTNNARLAAMLRQLAQYHAKDPNNLFMVRLAQGLTHLGKGTLTLCP
YHSDRQLMSQVAVAGLLTVLVSFLDVRNIILGKSHYVLYGLVAAMQPRMLVTFDEELRPL
PVSVRVGQAVDVVGQAGKPKTITGFQTHTTPVLLAHGERAELATEEFLPVTPILEGFVIL
RKNPNYDL
Ligands and cofactors
| ID | Name | Formula | Copies |
|---|
| ZN | Zinc ion | Zn | 1 |
| ATP | Adenosine-5'-triphosphate | C10 H16 N5 O13 P3 | 4 |
| ADP | Adenosine-5'-diphosphate | C10 H15 N5 O10 P2 | 2 |
| MG | Magnesium ion | Mg | 5 |
Primary citation
Cryo-EM structures and dynamics of substrate-engaged human 26S proteasome. Dong, Y., Zhang, S., Wu, Z. et al. Nature (2019) 565:49-55. DOI 10.1038/s41586-018-0736-4 · PubMed
Other PDB entries of the same protein (UniProt Q99460 (AlphaFold model), which also has an AlphaFold model), best resolution first:
- 5V1Y 1.42 Å, Crystal structure of the ternary RPN13 PRU-RPN2 (940-953)-ubiquitin complex
- 6OI4 1.76 Å, RPN13 (19-132)-RPN2 (940-952) pY950-Ub complex
- 5V1Z 2.0 Å, Crystal structure of the RPN13 PRU-RPN2 (932-953)-ubiquitin complex
- 9K53 2.5 Å, Structure of substrate-engaged human 26S proteasome RP-CP subcomplex in state ED2.1
- 8USD 2.7 Å, Rpn1/Nub1UBL-focused alignment of the non-substrate-engaged human 26S proteasome
- 8USB 2.73 Å, Non-substrate-engaged human 26S proteasome with Nub1/FAT10 bound to Rpn1
- 9MBP 2.75 Å, Substrate-engaged human 26S proteasome bound to midnolin with RPT1 at top of spiral…
- 9NKG 2.8 Å, Structure of substrate engaged MIDN-bound human 26S proteasome, EB-MIDN (Composite map)
- 9E8I 2.87 Å, Human proteasome in resting state conformation bound to TXNL1 in Forward conformation
- 9BV3 2.9 Å, M1B Midnolin-Proteasome
- 9E8H 2.9 Å, Human proteasome in resting state conformation bound to TXNL1 in backward conformation
- 9K4J 2.9 Å, Structure of substrate-engaged human 26S proteasome RP-CP subcomplex in state EA1.0
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