7D13: NERP-2 in a HFIP solution

NERP-2 in a HFIP solution. Determined by solution NMR. Released 11 Nov 2020.

Method: Solution NMR
Organism: Homo sapiens
Chains: 1
Atoms: 292
Mol. weight: 4.17 kDa
Released: 11 Nov 2020

Explore 7D13 in 3D Show helices and sheets RCSB PDB PDBe

Secondary structure: helices and β-sheets

7D13 contains 1 α-helix and 0 β-strands across 1 chain. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.

Chain A: 1 helix, 0 β-strands

Element	Residues	Length	Sheet
α-helix	311-345	35

Molecules and chains

Molecule	Chains	Type	Length	Organism	UniProt
Neurosecretory protein VGF	A	protein	39	Homo sapiens	O15240 (AlphaFold model)

Sequence of entity 1 (A), FASTA

>7D13_1 Neurosecretory protein VGF (chains A)
SQAEATRQAAAQEERLADLASDLLLQYLLQGGARQRGLG

Primary citation

Structure of neuroendocrine regulatory peptide-2 in membrane-mimicking environments. Park, O., Bang, J., Ryu, K. et al. Peptide Science (2020). DOI 10.1002/pep2.24206

Other PDB entries of the same protein (UniProt O15240 (AlphaFold model), which also has an AlphaFold model), best resolution first:

9S57 1.57 Å, The b1 and b2 domains of neuropilin-1 with a bound VGF TLQP-21 peptide
9S56 1.67 Å, The b1 and b2 domains of neuropilin-1 with a bound VGF TLQP-21 peptide
9KV8 3.17 Å, Structure of human TLQP21 bound to mouse C3aR in complex with Go
7D16 NERP-2 in a DPC solution
8H0G AQEE-30 in a HFIP solution
8H0U AQEE-30 in a DPC solution

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