8VWX: PDB entry 8VWX

Human Bcl-2 (G101V Mutant)/Bcl-xL Chimera Fused to Maltose-Binding Protein. Determined by X-ray diffraction at 1.77 Å resolution. Released 2 Oct 2024.

Method
X-ray diffraction
Resolution
1.77 Å
Organisms
Escherichia coli (strain K12), Homo sapiens
Chains
1
Atoms
4,397
Mol. weight
61.3 kDa
Released
2 Oct 2024

Explore 8VWX in 3D Show helices and sheets RCSB PDB PDBe

Secondary structure: helices and β-sheets

8VWX contains 31 α-helices and 24 β-strands across 1 chain. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.

Chain A: 31 helices, 24 β-strands

ElementResiduesLengthSheet
α-helix-366--3643
β-strand-356--35341
α-helix-346--33215
β-strand-328--32541
α-helix-320--3129
β-strand-304--30051
α-helix-299--2973
α-helix-296--2916
β-strand-28712
β-strand-28413
α-helix-280--2774
β-strand-27414
α-helix-272--2676
β-strand-265--26423
β-strand-261--26023
β-strand-257--25261
β-strand-249--24555
β-strand-23516
α-helix-234--2323
α-helix-231--2239
β-strand-218--21635
α-helix-209--20010
β-strand-196--19257
β-strand-187--18177
α-helix-177--16315
α-helix-153--1459
β-strand-141--13665
α-helix-134--1323
α-helix-131--1266
β-strand-121--11845
α-helix-117--1153
β-strand-114--11326
β-strand-110--10926
α-helix-1061
β-strand-105--10428
β-strand-103--9771
β-strand-9612
α-helix-90--847
α-helix-83--795
α-helix-76--6710
β-strand-62--6121
β-strand-5914
α-helix-58--527
α-helix-48--3811
β-strand-35--3428
α-helix-33--322
α-helix-27--1117
α-helix-6-2532
α-helix92-10716
α-helix123-13715
α-helix144-16320
α-helix168-18013
α-helix181-1855
α-helix186-1916
α-helix194-2029

Molecules and chains

MoleculeChainsTypeLengthOrganismUniProt
Maltose/maltodextrin-binding periplasmic protein fused to apoptosis regulator Bcl-2/Bcl-xL chimeraAprotein547Escherichia coli (strain K12), Homo sapiensP0AEX9 (AlphaFold model), P10415 (AlphaFold model), Q07817 (AlphaFold model)
Sequence of entity 1 (A), FASTA
>8VWX_1 Maltose/maltodextrin-binding periplasmic protein fused to apoptosis regulator Bcl-2/Bcl-xL chimera (chains A)
MHHHHHHHHHHENLYFQGKIEEGKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDK
LEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEITPAAAFQDKLYPFTWDAVRYNGK
LIAYPIAVEALSLIYNKDLLPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLIA
ADGGYAFKYAAGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGET
AMTINGPWAWSNIDTSAVNYGVTVLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFLEN
YLLTDEGLEAVNKDKPLGAVALKSYEEELAKDPRIAATMENAQKGEIMPNIPQMSAFWYA
VRTAVINAASGRQTVDEALKDAQTAARAAADNREIVMKYIHYKLSQRGYEWDAGDDVEEN
RTEAPEGTESEVVHLTLRQAVDDFSRRYRRDFAEMSSQLHLTPFTARGRFATVVEELFRD
GVNWGRIVAFFEFGGVMCVESVNREMSPLVDNIALWMTEYLNRHLHTWIQDNGGWDAFVE
LYGPSMR

Primary citation

Hydrogen/Deuterium Exchange and Protein Oxidative Footprinting with Mass Spectrometry Collectively Discriminate the Binding of Small-Molecule Therapeutics to Bcl-2. Sun, Y., Houde, D., Iacob, R.E. et al. Anal Chem (2025) 97:4329-4340. DOI 10.1021/acs.analchem.4c04516 · PubMed

Other PDB entries of the same protein (UniProt P0AEX9 (AlphaFold model), which also has an AlphaFold model), best resolution first:

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