8ZHB: 80S ribosome with A/A P/E tRNA and mRNA of WNV
80S ribosome with A/A P/E tRNA and mRNA of WNV. Determined by electron microscopy at 2.6 Å resolution. Released 21 May 2025.
- Method
- Electron microscopy
- Resolution
- 2.6 Å
- Organisms
- Saccharomyces cerevisiae S288C, West Nile virus
- Chains
- 81
- Atoms
- 202,562
- Mol. weight
- 3076.1 kDa
- Released
- 21 May 2025
Explore 8ZHB in 3D
Show helices and sheets
RCSB PDB
PDBe
Secondary structure: helices and β-sheets
8ZHB contains 482 α-helices and 505 β-strands across 74 chains. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.
Chain La: 5 helices, 9 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 12-20 | 9 | |
| α-helix | 24-30 | 7 | |
| β-strand | 32-34 | 3 | 1 |
| β-strand | 35 | 1 | 2 |
| α-helix | 37-43 | 7 | |
| β-strand | 47-49 | 3 | 1 |
| β-strand | 55-58 | 4 | 2 |
| β-strand | 67-69 | 3 | 2 |
| β-strand | 70-74 | 5 | 3 |
| β-strand | 79-88 | 10 | 3 |
| β-strand | 94-99 | 6 | 3 |
| α-helix | 101-103 | 3 | |
| β-strand | 104-108 | 5 | 2 |
| α-helix | 113-122 | 10 | |
Chain Lb: 5 helices, 5 β-strands
| Element | Residues | Length | Sheet |
|---|
| β-strand | 9-13 | 5 | 5 |
| β-strand | 22-29 | 8 | 5 |
| β-strand | 40-48 | 9 | 5 |
| α-helix | 49-52 | 4 | |
| α-helix | 61-65 | 5 | |
| β-strand | 69-76 | 8 | 5 |
| α-helix | 77-79 | 3 | |
| β-strand | 80-86 | 7 | 5 |
| α-helix | 104-123 | 20 | |
| α-helix | 128-131 | 4 | |
Chain Lc: 8 helices, 8 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 3-5 | 3 | |
| α-helix | 7-10 | 4 | |
| α-helix | 42-48 | 7 | |
| β-strand | 53 | 1 | 123 |
| α-helix | 65-68 | 4 | |
| β-strand | 72-74 | 3 | 9 |
| α-helix | 75-81 | 7 | |
| α-helix | 84-92 | 9 | |
| β-strand | 99-100 | 2 | 97 |
| β-strand | 101-103 | 3 | 10 |
| α-helix | 104-107 | 4 | |
| β-strand | 111-113 | 3 | 9 |
| β-strand | 124-127 | 4 | 10 |
| β-strand | 129-130 | 2 | 9 |
| α-helix | 132-141 | 10 | |
| β-strand | 144-147 | 4 | 10 |
Chain Ld: 3 helices, 0 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 12-18 | 7 | |
| α-helix | 22-26 | 5 | |
| α-helix | 37-57 | 21 | |
Chain LD: 7 helices, 18 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 6-9 | 4 | |
| α-helix | 29-31 | 3 | |
| α-helix | 35-38 | 4 | |
| β-strand | 40-49 | 10 | 13 |
| β-strand | 58-64 | 7 | 13 |
| β-strand | 71-77 | 7 | 13 |
| α-helix | 78 | 1 | |
| β-strand | 79 | 1 | 14 |
| β-strand | 83 | 1 | 15 |
| β-strand | 87-91 | 5 | 13 |
| β-strand | 103 | 1 | 16 |
| β-strand | 112-114 | 3 | 17 |
| β-strand | 116 | 1 | 18 |
| β-strand | 126 | 1 | 18 |
| β-strand | 134-140 | 7 | 17 |
| β-strand | 145-149 | 5 | 17 |
| β-strand | 155-159 | 5 | 17 |
| β-strand | 163 | 1 | 16 |
| β-strand | 165-166 | 2 | 17 |
| β-strand | 169 | 1 | 14 |
| α-helix | 174-176 | 3 | |
| α-helix | 182-190 | 9 | |
| α-helix | 201-203 | 3 | |
| β-strand | 224-225 | 2 | 19 |
| β-strand | 237-238 | 2 | 19 |
Chain Le: 4 helices, 4 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 10-20 | 11 | |
| β-strand | 22-25 | 4 | 26 |
| α-helix | 27-36 | 10 | |
| β-strand | 41-44 | 4 | 26 |
| α-helix | 50-62 | 13 | |
| β-strand | 66-69 | 4 | 26 |
| α-helix | 74-81 | 8 | |
| β-strand | 89-94 | 6 | 26 |
Chain LE: 15 helices, 18 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 14-16 | 3 | |
| α-helix | 33-35 | 3 | |
| β-strand | 36 | 1 | 21 |
| α-helix | 40-41 | 2 | |
| β-strand | 45-60 | 16 | 22 |
| β-strand | 70-80 | 11 | 22 |
| α-helix | 82-83 | 2 | |
| β-strand | 84-96 | 13 | 23 |
| β-strand | 98-105 | 8 | 23 |
| α-helix | 112-118 | 7 | |
| α-helix | 131-136 | 6 | |
| α-helix | 145-153 | 9 | |
| β-strand | 157-163 | 7 | 23 |
| α-helix | 176-177 | 2 | |
| β-strand | 178-182 | 5 | 23 |
| β-strand | 185 | 1 | 21 |
| α-helix | 188-197 | 10 | |
| β-strand | 201-203 | 3 | 23 |
| α-helix | 204 | 1 | |
| α-helix | 205-207 | 3 | |
| β-strand | 214-220 | 7 | 22 |
| α-helix | 221-223 | 3 | |
| β-strand | 226-227 | 2 | 24 |
| α-helix | 229-233 | 5 | |
| α-helix | 235-239 | 5 | |
| β-strand | 268-269 | 2 | 24 |
| β-strand | 274-286 | 13 | 22 |
| β-strand | 311 | 1 | 25 |
| β-strand | 315 | 1 | 25 |
| β-strand | 321-325 | 5 | 22 |
| β-strand | 335-340 | 6 | 22 |
| β-strand | 356-359 | 4 | 22 |
| α-helix | 373-380 | 8 | |
Chain Lf: 5 helices, 5 β-strands
| Element | Residues | Length | Sheet |
|---|
| β-strand | 9-15 | 7 | 33 |
| α-helix | 16-19 | 4 | |
| α-helix | 25-27 | 3 | |
| α-helix | 28-44 | 17 | |
| β-strand | 49-51 | 3 | 33 |
| α-helix | 53-59 | 7 | |
| α-helix | 60-62 | 3 | |
| β-strand | 70-79 | 10 | 33 |
| β-strand | 89-95 | 7 | 33 |
| β-strand | 107-109 | 3 | 33 |
66 more chain groups are not listed. Open the entry in the viewer and use the sequence panel to see them.
Molecules and chains
| Molecule | Chains | Type | Length | Organism | UniProt |
|---|
| 25S rRNA (3393-mer) | LA | RNA | 3393 | Saccharomyces cerevisiae S288C | |
| 5S rRNA (121-mer) | LB | RNA | 121 | Saccharomyces cerevisiae S288C | |
| 5.8S rRNA (158-mer) | LC | RNA | 158 | Saccharomyces cerevisiae S288C | |
| Large ribosomal subunit protein uL2A | LD | protein | 251 | Saccharomyces cerevisiae S288C | P0CX45 (AlphaFold model) |
| Large ribosomal subunit protein uL3 | LE | protein | 386 | Saccharomyces cerevisiae S288C | P14126 (AlphaFold model) |
| Large ribosomal subunit protein uL4A | LF | protein | 361 | Saccharomyces cerevisiae S288C | P10664 (AlphaFold model) |
| Large ribosomal subunit protein uL18 | LG | protein | 294 | Saccharomyces cerevisiae S288C | P26321 (AlphaFold model) |
| Large ribosomal subunit protein eL6B | LH | protein | 175 | Saccharomyces cerevisiae S288C | P05739 |
| Large ribosomal subunit protein uL30A | LI | protein | 222 | Saccharomyces cerevisiae S288C | P05737 |
| Large ribosomal subunit protein eL8A | LJ | protein | 233 | Saccharomyces cerevisiae S288C | P17076 |
| Large ribosomal subunit protein uL6A | LK | protein | 191 | Saccharomyces cerevisiae S288C | P05738 |
| Large ribosomal subunit protein uL16 | LL | protein | 218 | Saccharomyces cerevisiae S288C | P41805 |
69 more molecules are not listed.
Sequence of entity 1 (LA), FASTA
>8ZHB_1 25S rRNA (3393-MER) (chains LA)
UUGACCUCAAAUCAGGUAGGAGUACCCGCUGAACUUAAGCAUAUCAAUAAGCGGAGGAAA
AGAAACCAACCGGGAUUGCCUUAGUAACGGCGAGUGAAGCGGCAAAAGCUCAAAUUUGAA
AUCUGGUACCUUCGGUGCCCGAGUUGUAAUUUGGAGAGGGCAACUUUGGGGCCGUUCCUU
GUCUAUGUUCCUUGGAACAGGACGUCAUAGAGGGUGAGAAUCCCGUGUGGCGAGGAGUGC
GGUUCUUUGUAAAGUGCCUUCGAAGAGUCGAGUUGUUUGGGAAUGCAGCUCUAAGUGGGU
GGUAAAUUCCAUCUAAAGCUAAAUAUUGGCGAGAGACCGAUAGCGAACAAGUACAGUGAU
GGAAAGAUGAAAAGAACUUUGAAAAGAGAGUGAAAAAGUACGUGAAAUUGUUGAAAGGGA
AGGGCAUUUGAUCAGACAUGGUGUUUUGUGCCCUCUGCUCCUUGUGGGUAGGGGAAUCUC
GCAUUUCACUGGCCAGCAUCAGUUUUGGUGGCAGGAUAAAUCCAUAGGAAUGUAGCUUGC
CUCGGUAAGUAUUAUAGCCUGUGGGAAUACUGCCAGCUGGGACUGAGGACUGCGACGUAA
GUCAAGGAUGCUGGCAUAAUGGUUAUAUGCCGCCCGUCUUGAAACACGGACCAAGGAGUC
UAACGUCUAUGCGAGUGUUUGGGUGUAAAACCCAUACGCGUAAUGAAAGUGAACGUAGGU
UGGGGCCUCGCAAGAGGUGCACAAUCGACCGAUCCUGAUGUCUUCGGAUGGAUUUGAGUA
AGAGCAUAGCUGUUGGGACCCGAAAGAUGGUGAACUAUGCCUGAAUAGGGUGAAGCCAGA
GGAAACUCUGGUGGAGGCUCGUAGCGGUUCUGACGUGCAAAUCGAUCGUCGAAUUUGGGU
AUAGGGGCGAAAGACUAAUCGAACCAUCUAGUAGCUGGUUCCUGCCGAAGUUUCCCUCAG
GAUAGCAGAAGCUCGUAUCAGUUUUAUGAGGUAAAGCGAAUGAUUAGAGGUUCCGGGGUC
GAAAUGACCUUGACCUAUUCUCAAACUUUAAAUAUGUAAGAAGUCCUUGUUACUUAAUUG
AACGUGGACAUUUGAAUGAAGAGCUUUUAGUGGGCCAUUUUUGGUAAGCAGAACUGGCGA
UGCGGGAUGAACCGAACGUAGAGUUAAGGUGCCGGAAUACACGCUCAUCAGACACCACAA
AAGGUGUUAGUUCAUCUAGACAGCCGGACGGUGGCCAUGGAAGUCGGAAUCCGCUAAGGA
GUGUGUAACAACUCACCGGCCGAAUGAACUAGCCCUGAAAAUGGAUGGCGCUCAAGCGUG
UUACCUAUACUCUACCGUCAGGGUUGAUAUGAUGCCCUGACGAGUAGGCAGGCGUGGAGG
UCAGUGACGAAGCCUAGACCGUAAGGUCGGGUCGAACGGCCUCUAGUGCAGAUCUUGGUG
GUAGUAGCAAAUAUUCAAAUGAGAACUUUGAAGACUGAAGUGGGGAAAGGUUCCACGUCA
ACAGCAGUUGGACGUGGGUUAGUCGAUCCUAAGAGAUGGGGAAGCUCCGUUUCAAAGGCC
UGAUUUUAUGCAGGCCACCAUCGAAAGGGAAUCCGGUUAAGAUUCCGGAACCUGGAUAUG
GAUUCUUCACGGUAACGUAACUGAAUGUGGAGACGUCGGCGCGAGCCCUGGGAGGAGUUA
UCUUUUCUUCUUAACAGCUUAUCACCCCGGAAUUGGUUUAUCCGGAGAUGGGGUCUUAUG
GCUGGAAGAGGCCAGCACCUUUGCUGGCUCCGGUGCGCUUGUGACGGCCCGUGAAAAUCC
ACAGGAAGGAAUAGUUUUCAUGCCAGGUCGUACUGAUAACCGCAGCAGGUCUCCAAGGUG
AACAGCCUCUAGUUGAUAGAAUAAUGUAGAUAAGGGAAGUCGGCAAAAUAGAUCCGUAAC
UUCGGGAUAAGGAUUGGCUCUAAGGGUCGGGUAGUGAGGGCCUUGGUCAGACGCAGCGGG
CGUGCUUGUGGACUGCUUGGUGGGGCUUGCUCUGCUAGGCGGACUACUUGCGUGCCUUGU
UGUAGACGGCCUUGGUAGGUCUCUUGUAGACCGUCGCUUGCUACAAUUAACGAUCAACUU
AGAACUGGUACGGACAAGGGGAAUCUGACUGUCUAAUUAAAACAUAGCAUUGCGAUGGUC
AGAAAGUGAUGUUGACGCAAUGUGAUUUCUGCCCAGUGCUCUGAAUGUCAAAGUGAAGAA
AUUCAACCAAGCGCGGGUAAACGGCGGGAGUAACUAUGACUCUCUUAAGGUAGCCAAAUG
CCUCGUCAUCUAAUUAGUGACGCGCAUGAAUGGAUUAACGAGAUUCCCACUGUCCCUAUC
UACUAUCUAGCGAAACCACAGCCAAGGGAACGGGCUUGGCAGAAUCAGCGGGGAAAGAAG
ACCCUGUUGAGCUUGACUCUAGUUUGACAUUGUGAAGAGACAUAGAGGGUGUAGAAUAAG
UGGGAGCUUCGGCGCCAGUGAAAUACCACUACCUUUAUAGUUUCUUUACUUAUUCAAUGA
AGCGGAGCUGGAAUUCAUUUUCCACGUUCUAGCAUUCAAGGUCCCAUUCGGGGCUGAUCC
GGGUUGAAGACAUUGUCAGGUGGGGAGUUUGGCUGGGGCGGCACAUCUGUUAAACGAUAA
CGCAGAUGUCCUAAGGGGGGCUCAUGGAGAACAGAAAUCUCCAGUAGAACAAAAGGGUAA
AAGCCCCCUUGAUUUUGAUUUUCAGUGUGAAUACAAACCAUGAAAGUGUGGCCUAUCGAU
CCUUUAGUCCCUCGGAAUUUGAGGCUAGAGGUGCCAGAAAAGUUACCACAGGGAUAACUG
GCUUGUGGCAGUCAAGCGUUCAUAGCGACAUUGCUUUUUGAUUCUUCGAUGUCGGCUCUU
CCUAUCAUACCGAAGCAGAAUUCGGUAAGCGUUGGAUUGUUCACCCACUAAUAGGGAACG
UGAGCUGGGUUUAGACCGUCGUGAGACAGGUUAGUUUUACCCUACUGAUGAAUGUUACCG
CAAUAGUAAUUGAACUUAGUACGAGAGGAACAGUUCAUUCGGAUAAUUGGUUUUUGCGGC
UGUCUGAUCAGGCAUUGCCGCGAAGCUACCAUCCGCUGGAUUAUGGCUGAACGCCUCUAA
GUCAGAAUCCAUGCUAGAACGCGGUGAUUUCUUUGCUCCACACAAUAUAGAUGGAUACGA
AUAAGGCGUCCUUGUGGCGUCGCUGAACCAUAGCAGGCUAGCAACGGUGCACUUGGCGGA
AAGGCCUUGGGUGCUUGCUGGCGAAUUGCAAUGUCAUUUUGCGUGGGGAUAAAUCAUUUG
UAUACGACUUAGAUGUACAACGGGGUAUUGUAAGCAGUAGAGUAGCCUUGUUGUUACGAU
CUGCUGAGAUUAAGCCUUUGUUGUCUGAUUUGU
Sequence of entity 2 (LB), FASTA
>8ZHB_2 5S rRNA (121-MER) (chains LB)
GGUUGCGGCCAUAUCUACCAGAAAGCACCGUUUCCCGUCCGAUCAACUGUAGUUAAGCUG
GUAAGAGCCUGACCGAGUAGUGUAGUGGGUGACCAUACGCGAAACUCAGGUGCUGCAAUC
U
Sequence of entity 3 (LC), FASTA
>8ZHB_3 5.8S rRNA (158-MER) (chains LC)
AAACUUUCAACAACGGAUCUCUUGGUUCUCGCAUCGAUGAAGAACGCAGCGAAAUGCGAU
ACGUAAUGUGAAUUGCAGAAUUCCGUGAAUCAUCGAAUCUUUGAACGCACAUUGCGCCCC
UUGGUAUUCCAGGGGGCAUGCCUGUUUGAGCGUCAUUU
Sequence of entity 4 (LD), FASTA
>8ZHB_4 Large ribosomal subunit protein uL2A (chains LD)
GRVIRNQRKGAGSIFTSHTRLRQGAAKLRTLDYAERHGYIRGIVKQIVHDSGRGAPLAKV
VFRDPYKYRLREEIFIANEGVHTGQFIYAGKKASLNVGNVLPLGSVPEGTIVSNVEEKPG
DRGALARASGNYVIIIGHNPDENKTRVRLPSGAKKVISSDARGVIGVIAGGGRVDKPLLK
AGRAFHKYRLKRNSWPKTRGVAMNPVDHPHGGGNHQHIGKASTISRGAVSGQKAGLIAAR
RTGLLRGSQKT
Sequence of entity 5 (LE), FASTA
>8ZHB_5 Large ribosomal subunit protein uL3 (chains LE)
SHRKYEAPRHGHLGFLPRKRAASIRARVKAFPKDDRSKPVALTSFLGYKAGMTTIVRDLD
RPGSKFHKREVVEAVTVVDTPPVVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYKN
WYKSKKKAFTKYSAKYAQDGAGIERELARIKKYASVVRVLVHTQIRKTPLAQKKAHLAEI
QLNGGSISEKVDWAREHFEKTVAVDSVFEQNEMIDAIAVTKGHGFEGVTHRWGTKKLPRK
THRGLRKVACIGAWHPAHVMWSVARAGQRGYHSRTSINHKIYRVGKGDDEANGATSFDRT
KKTITPMGGFVHYGEIKNDFIMVKGCIPGNRKRIVTLRKSLYTNTSRKALEEVSLKWIDT
ASKFGKGRFQTPAEKHAFMGTLKKDL
Sequence of entity 6 (LF), FASTA
>8ZHB_6 Large ribosomal subunit protein uL4A (chains LF)
SRPQVTVHSLTGEATANALPLPAVFSAPIRPDIVHTVFTSVNKNKRQAYAVSEKAGHQTS
AESWGTGRAVARIPRVGGGGTGRSGQGAFGNMCRGGRMFAPTKTWRKWNVKVNHNEKRYA
TASAIAATAVASLVLARGHRVEKIPEIPLVVSTDLESIQKTKEAVAALKAVGAHSDLLKV
LKSKKLRAGKGKYRNRRWTQRRGPLVVYAEDNGIVKALRNVPGVETANVASLNLLQLAPG
AHLGRFVIWTEAAFTKLDQVWGSETVASSKVGYTLPSHIISTSDVTRIINSSEIQSAIRP
AGQATQKRTHVLKKNPLKNKQVLLRLNPYAKVFAAEKLGSKKAEKTGTKPAAVFTETLKH
D
Sequence of entity 7 (LG), FASTA
>8ZHB_7 Large ribosomal subunit protein uL18 (chains LG)
QKDAKSSAYSSRFQTPFRRRREGKTDYYQRKRLVTQHKAKYNTPKYRLVVRFTNKDIICQ
IISSTITGDVVLAAAYSHELPRYGITHGLTNWAAAYATGLLIARRTLQKLGLDETYKGVE
EVEGEYELTEAVEDGPRPFKVFLDIGLQRTTTGARVFGALKGASDGGLYVPHSENRFPGW
DFETEEIDPELLRSYIFGGHVSQYMEELADDDEERFSELFKGYLADDIDADSLEDIYTSA
HEAIRADPAFKPTEKKFTKEQYAAESKKYRQTKLSKEERAARVAAKIAALAGQQ
Sequence of entity 8 (LH), FASTA
>8ZHB_8 Large ribosomal subunit protein eL6B (chains LH)
TAQQAPKWYPSEDVAAPKKTRKAVRPQKLRASLVPGTVLILLAGRFRGKRVVYLKHLEDN
TLLVTGPFKVNGVPLRRVNARYVIATSTKVSVEGVNVEKFNVEYFAKEKLTKKEKKEANL
FPEQQTKEIKTERVEDQKVVDKALLAEIKKTPLLKQYLSASFSLKNGDKPHLLKF
Sequence of entity 9 (LI), FASTA
>8ZHB_9 Large ribosomal subunit protein uL30A (chains LI)
AEQVAAERAARKAANKEKRAIILERNAAYQKEYETAERNIIQAKRDAKAAGSYYVEAQHK
LVFVVRIKGINKIPPKPRKVLQLLRLTRINSGTFVKVTKATLELLKLIEPYVAYGYPSYS
TIRQLVYKRGFGKINKQRVPLSDNAIIEANLGKYGILSIDDLIHEIITVGPHFKQANNFL
WPFKLSNPSGGWGVPRKFKHFIQGGSFGNREEFINKLVKSMN
Sequence of entity 10 (LJ), FASTA
>8ZHB_10 Large ribosomal subunit protein eL8A (chains LJ)
NPLTHSTPKNFGIGQAVQPKRNLSRYVKWPEYVRVQRQKKILSIRLKVPPTIAQFQYTLD
RNTAAETFKLFNKYRPETAAEKKERLTKEAAAVAEGKSKQDASPKPYAVKYGLNHVVALI
ENKKAKLVLIANDVDPIELVVFLPALCKKMGVPYAIVKGKARLGTLVNQKTSAVAALTEV
RAEDEAALAKLVSTIDANFADKYDEVKKHWGGGILGNKAQAKMDKRAKNSDSA
Sequence of entity 11 (LK), FASTA
>8ZHB_11 Large ribosomal subunit protein uL6A (chains LK)
MKYIQTEQQIEVPEGVTVSIKSRIVKVVGPRGTLTKNLKHIDVTFTKVNNQLIKVAVHNG
GRKHVAALRTVKSLVDNMITGVTKGYKYKMRYVYAHFPINVNIVEKDGAKFIEVRNFLGD
KKIRNVPVRDGVTIEFSTNVKDEIVLSGNSVEDVSQNAADLQQICRVRNKDIRKFLDGIY
VSHKGFITEDL
Sequence of entity 12 (LL), FASTA
>8ZHB_12 Large ribosomal subunit protein uL16 (chains LL)
ARRPARCYRYQKNKPYPKSRYNRAVPDSKIRIYDLGKKKATVDEFPLCVHLVSNELEQLS
SEALEAARICANKYMTTVSGRDAFHLRVRVHPFHVLRINKMLSCAGADRLQQGMRGAWGK
PHGLAARVDIGQIIFSVRTKDSNKDVVVEGLRRARYKFPGQQKIILSKKWGFTNLDRPEY
LKKREAGEVKDDGAFVKFLSKKGSLENNIREFPEYFAA
Primary citation
Flexibilities and conservations in the structural basis of viral -1 programmed ribosomal frameshifting. Wu, M., Wan, X., Zhou, H. et al. To be published.
Other PDB entries of the same protein (UniProt P0CX45 (AlphaFold model), which also has an AlphaFold model), best resolution first:
- 9PN5 1.75 Å, Composite map of hypomethylated 80S ribosome treated with hygromycin B
- 8CCS 1.97 Å, 80S S. cerevisiae ribosome with ligands in hybrid-1 pre-translocation (PRE-H1) complex
- 8CDR 2.04 Å, Translocation intermediate 2 (TI-2) of 80S S. cerevisiae ribosome with ligands and eEF2…
- 8CEH 2.05 Å, Translocation intermediate 4 (TI-4) of 80S S. cerevisiae ribosome with ligands and eEF2…
- 8P8N 2.15 Å, Mouse RPL39 integrated into the yeast 60S ribosomal subunit
- 8PFR 2.15 Å, Mouse RPL39L integrated into the yeast 60S ribosomal subunit
- 8EVT 2.2 Å, Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome…
- 8T2Y 2.2 Å, Hypomethylated yeast 80S bound with cycloheximide, P-site tRNA, and A-site tRNA,…
- 8P8U 2.23 Å, Yeast 60S ribosomal subunit
- 8CGN 2.28 Å, Non-rotated 80S S. cerevisiae ribosome with ligands
- 8ZHC 2.3 Å, pre-frameshift complex of yeast 80S ribosome with eRF1 and mRNA of WNV
- 7UOO 2.34 Å, Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state
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