9G5B: 28S ribosomal protein S34, mitochondrial
Assembly intermediate of human mitochondrial ribosome small subunit (State A). Determined by electron microscopy at 3.2 Å resolution. Released 23 Apr 2025.
- Method
- Electron microscopy
- Resolution
- 3.2 Å
- Organism
- Homo sapiens
- Chains
- 32
- Atoms
- 68,040
- Mol. weight
- 1265.3 kDa
- Ligands
- GDP, ATP, FES, ZN
- Released
- 23 Apr 2025
Explore 9G5B in 3D
Show helices and sheets
RCSB PDB
PDBe
Secondary structure: helices and β-sheets
9G5B contains 353 α-helices and 210 β-strands across 31 chains. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.
Chain 0: 16 helices, 12 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 5-8 | 4 | |
| α-helix | 10-25 | 16 | |
| α-helix | 30-33 | 4 | |
| β-strand | 37 | 1 | 1 |
| β-strand | 42 | 1 | 1 |
| α-helix | 48 | 1 | |
| β-strand | 49 | 1 | 1 |
| α-helix | 50-51 | 2 | |
| α-helix | 52-54 | 3 | |
| α-helix | 55-60 | 6 | |
| β-strand | 62 | 1 | 2 |
| α-helix | 64-68 | 5 | |
| α-helix | 72-75 | 4 | |
| β-strand | 80-82 | 3 | 2 |
| α-helix | 83-88 | 6 | |
| β-strand | 94-95 | 2 | 2 |
| β-strand | 99-102 | 4 | 2 |
| β-strand | 112-120 | 9 | 2 |
| β-strand | 123-130 | 8 | 2 |
| β-strand | 139-141 | 3 | 2 |
| α-helix | 147-151 | 5 | |
| β-strand | 163-165 | 3 | 3 |
| α-helix | 166-167 | 2 | |
| α-helix | 168-181 | 14 | |
| α-helix | 187-189 | 3 | |
| β-strand | 190-192 | 3 | 3 |
| α-helix | 204-205 | 2 | |
| α-helix | 207-209 | 3 | |
Chain 1: 21 helices, 6 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 50-55 | 6 | |
| α-helix | 56-59 | 4 | |
| α-helix | 66-69 | 4 | |
| β-strand | 86-87 | 2 | 6 |
| α-helix | 89-91 | 3 | |
| α-helix | 96 | 1 | |
| β-strand | 97-98 | 2 | 6 |
| α-helix | 103-107 | 5 | |
| α-helix | 116-126 | 11 | |
| α-helix | 127-129 | 3 | |
| α-helix | 132-134 | 3 | |
| α-helix | 140-146 | 7 | |
| β-strand | 150-156 | 7 | 7 |
| α-helix | 166-169 | 4 | |
| β-strand | 171-176 | 6 | 7 |
| α-helix | 177-179 | 3 | |
| α-helix | 184-194 | 11 | |
| α-helix | 195-197 | 3 | |
| β-strand | 198-199 | 2 | 7 |
| β-strand | 204-209 | 6 | 7 |
| α-helix | 215-234 | 20 | |
| α-helix | 239-241 | 3 | |
| α-helix | 245-247 | 3 | |
| α-helix | 257-273 | 17 | |
| α-helix | 280-284 | 5 | |
| α-helix | 287-301 | 15 | |
| α-helix | 306-320 | 15 | |
Chain 4: 40 helices, 1 β-strand
| Element | Residues | Length | Sheet |
|---|
| α-helix | 59-60 | 2 | |
| β-strand | 61-64 | 4 | 15 |
| α-helix | 69-75 | 7 | |
| α-helix | 79-81 | 3 | |
| α-helix | 100-123 | 24 | |
| α-helix | 125-127 | 3 | |
| α-helix | 138-140 | 3 | |
| α-helix | 154-163 | 10 | |
| α-helix | 166-179 | 14 | |
| α-helix | 185-198 | 14 | |
| α-helix | 202-204 | 3 | |
| α-helix | 243-250 | 8 | |
| α-helix | 256-268 | 13 | |
| α-helix | 272-284 | 13 | |
| α-helix | 291-304 | 14 | |
| α-helix | 309-326 | 18 | |
| α-helix | 328-330 | 3 | |
| α-helix | 332-342 | 11 | |
| α-helix | 347-363 | 17 | |
| α-helix | 369-379 | 11 | |
| α-helix | 389-400 | 12 | |
| α-helix | 410-413 | 4 | |
| α-helix | 415-426 | 12 | |
| α-helix | 429-440 | 12 | |
| α-helix | 444-448 | 5 | |
| α-helix | 451-468 | 18 | |
| α-helix | 471-481 | 11 | |
| α-helix | 487-489 | 3 | |
| α-helix | 490-503 | 14 | |
| α-helix | 509-519 | 11 | |
| α-helix | 525-536 | 12 | |
| α-helix | 542-560 | 19 | |
| α-helix | 563-566 | 4 | |
| α-helix | 568-569 | 2 | |
| α-helix | 573-586 | 14 | |
| α-helix | 589-602 | 14 | |
| α-helix | 604-607 | 4 | |
| α-helix | 608-621 | 14 | |
| α-helix | 624-636 | 13 | |
| α-helix | 641-652 | 12 | |
| α-helix | 657-669 | 13 | |
Chain 9: 18 helices, 27 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 87-94 | 8 | |
| α-helix | 200-204 | 5 | |
| α-helix | 206-209 | 4 | |
| β-strand | 216-222 | 7 | 16 |
| α-helix | 231-233 | 3 | |
| α-helix | 234-237 | 4 | |
| β-strand | 242-248 | 7 | 16 |
| α-helix | 260-274 | 15 | |
| β-strand | 278 | 1 | 16 |
| β-strand | 309-315 | 7 | 16 |
| β-strand | 317 | 1 | 17 |
| β-strand | 322 | 1 | 17 |
| α-helix | 324-333 | 10 | |
| β-strand | 341-345 | 5 | 16 |
| β-strand | 346 | 1 | 18 |
| α-helix | 351-359 | 9 | |
| β-strand | 376-379 | 4 | 16 |
| β-strand | 386-391 | 6 | 16 |
| β-strand | 493-496 | 4 | 16 |
| α-helix | 497-499 | 3 | |
| β-strand | 500 | 1 | 18 |
| α-helix | 501-502 | 2 | |
| α-helix | 506-509 | 4 | |
| α-helix | 512-518 | 7 | |
| β-strand | 527-531 | 5 | 19 |
| β-strand | 535-539 | 5 | 20 |
| β-strand | 543-548 | 6 | 20 |
| β-strand | 554-560 | 7 | 19 |
| β-strand | 566-570 | 5 | 20 |
| α-helix | 571-581 | 11 | |
| α-helix | 593-599 | 7 | |
| α-helix | 601-602 | 2 | |
| β-strand | 603-609 | 7 | 20 |
| β-strand | 613 | 1 | 21 |
| β-strand | 621-624 | 4 | 19 |
| β-strand | 629-635 | 7 | 19 |
| α-helix | 636 | 1 | |
| β-strand | 637 | 1 | 21 |
| β-strand | 642-648 | 7 | 20 |
| β-strand | 654-656 | 3 | 19 |
| α-helix | 661-663 | 3 | |
| β-strand | 670 | 1 | 22 |
| β-strand | 676 | 1 | 19 |
| β-strand | 677 | 1 | 22 |
| α-helix | 678-679 | 2 | |
Chain a: 4 helices, 3 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 91-108 | 18 | |
| α-helix | 115-120 | 6 | |
| β-strand | 124-129 | 6 | 23 |
| β-strand | 136-141 | 6 | 23 |
| α-helix | 146-170 | 25 | |
| β-strand | 179-184 | 6 | 23 |
| α-helix | 187-197 | 11 | |
Chain B: 12 helices, 10 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 56-59 | 4 | |
| α-helix | 60-64 | 5 | |
| α-helix | 65-68 | 4 | |
| α-helix | 75-78 | 4 | |
| α-helix | 81-87 | 7 | |
| β-strand | 91-94 | 4 | 24 |
| α-helix | 100-102 | 3 | |
| β-strand | 106-110 | 5 | 24 |
| β-strand | 113-116 | 4 | 24 |
| α-helix | 118-137 | 20 | |
| β-strand | 142-145 | 4 | 25 |
| α-helix | 152-162 | 11 | |
| β-strand | 165-167 | 3 | 25 |
| α-helix | 179-183 | 5 | |
| α-helix | 187-190 | 4 | |
| β-strand | 192-195 | 4 | 25 |
| β-strand | 199 | 1 | 26 |
| β-strand | 205 | 1 | 26 |
| α-helix | 207-215 | 9 | |
| β-strand | 219-221 | 3 | 25 |
| β-strand | 234-235 | 2 | 25 |
| α-helix | 243-273 | 31 | |
Chain c: 19 helices, 8 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 13-17 | 5 | |
| α-helix | 18-25 | 8 | |
| α-helix | 41-51 | 11 | |
| β-strand | 58-62 | 5 | 27 |
| α-helix | 68-75 | 8 | |
| β-strand | 80-84 | 5 | 27 |
| α-helix | 91-100 | 10 | |
| β-strand | 106-108 | 3 | 27 |
| β-strand | 136-140 | 5 | 27 |
| α-helix | 144-159 | 16 | |
| α-helix | 163-167 | 5 | |
| β-strand | 171-177 | 7 | 27 |
| α-helix | 178-184 | 7 | |
| α-helix | 186-187 | 2 | |
| α-helix | 195-201 | 7 | |
| β-strand | 204-208 | 5 | 27 |
| β-strand | 212 | 1 | 27 |
| β-strand | 225-232 | 8 | 27 |
| α-helix | 242-253 | 12 | |
| α-helix | 260-264 | 5 | |
| α-helix | 265-267 | 3 | |
| α-helix | 270-272 | 3 | |
| α-helix | 273-283 | 11 | |
| α-helix | 292-294 | 3 | |
| α-helix | 297-313 | 17 | |
| α-helix | 315-317 | 3 | |
| α-helix | 322-326 | 5 | |
Chain C: 4 helices, 8 β-strands
| Element | Residues | Length | Sheet |
|---|
| β-strand | 50-51 | 2 | 28 |
| α-helix | 53-56 | 4 | |
| α-helix | 59-61 | 3 | |
| β-strand | 62 | 1 | 29 |
| β-strand | 66 | 1 | 29 |
| β-strand | 70-71 | 2 | 30 |
| α-helix | 82-99 | 18 | |
| β-strand | 104-111 | 8 | 30 |
| β-strand | 117-124 | 8 | 30 |
| α-helix | 129-147 | 19 | |
| β-strand | 151-158 | 8 | 30 |
| β-strand | 165-166 | 2 | 28 |
23 more chain groups are not listed. Open the entry in the viewer and use the sequence panel to see them.
Molecules and chains
| Molecule | Chains | Type | Length | Organism | UniProt |
|---|
| 28S ribosomal protein S34, mitochondrial | 0 | protein | 218 | Homo sapiens | P82930 (AlphaFold model) |
| 28S ribosomal protein S35, mitochondrial | 1 | protein | 323 | Homo sapiens | P82673 (AlphaFold model) |
| Pentatricopeptide repeat domain-containing protein 3, mitochondrial | 4 | protein | 689 | Homo sapiens | Q96EY7 (AlphaFold model) |
| Nitric oxide-associated protein 1 | 9 | protein | 706 | Homo sapiens | Q8NC60 (AlphaFold model) |
| 12S mitochondrial rRNA | A | RNA | 955 | Homo sapiens | |
| 28S ribosomal protein S2, mitochondrial | B | protein | 296 | Homo sapiens | Q9Y399 |
| 28S ribosomal protein S24, mitochondrial | C | protein | 167 | Homo sapiens | Q96EL2 |
| 28S ribosomal protein S5, mitochondrial | D | protein | 430 | Homo sapiens | P82675 |
| 28S ribosomal protein S6, mitochondrial | E | protein | 125 | Homo sapiens | P82932 |
| 28S ribosomal protein S7, mitochondrial | F | protein | 242 | Homo sapiens | Q9Y2R9 |
| 28S ribosomal protein S9, mitochondrial | G | protein | 396 | Homo sapiens | P82933 |
| 28S ribosomal protein S10, mitochondrial | H | protein | 201 | Homo sapiens | P82664 |
20 more molecules are not listed.
Sequence of entity 1 (0), FASTA
>9G5B_1 28S ribosomal protein S34, mitochondrial (chains 0)
MARKKVRPRLIAELARRVRALREQLNRPRDSQLYAVDYETLTRPFSGRRLPVRAWADVRR
ESRLLQLLGRLPLFGLGRLVTRKSWLWQHDEPCYWRLTRVRPDYTAQNLDHGKAWGILTF
KGKTESEAREIEHVMYHDWRLVPKHEEEAFTAFTPAPEDSLASVPYPPLLRAMIIAERQK
NGDTSTEEPMLNVQRIRMEPWDYPAKQEDKGRAKGTPV
Sequence of entity 2 (1), FASTA
>9G5B_2 28S ribosomal protein S35, mitochondrial (chains 1)
MAAAALPAWLSLQSRARTLRAFSTAVYSATPVPTPSLPERTPGNERPPRRKALPPRTEKM
AVDQDWPSVYPVAAPFKPSAVPLPVRMGYPVKKGVPMAKEGNLELLKIPNFLHLTPVAIK
KHCEALKDFCTEWPAALDSDEKCEKHFPIEIDSTDYVSSGPSVRNPRARVVVLRVKLSSL
NLDDHAKKKLIKLVGERYCKTTDVLTIKTDRCPLRRQNYDYAVYLLTVLYHESWNTEEWE
KSKTEADMEEYIWENSSSERNILETLLQMKAAEKNMEINKEELLGTKEIEEYKKSVVSLK
NEEENENSISQYKESVKRLLNVT
Sequence of entity 3 (4), FASTA
>9G5B_3 Pentatricopeptide repeat domain-containing protein 3, mitochondrial (chains 4)
MAVVSAVRWLGLRSRLGQPLTGRRAGLCEQARSCRFYSGSATLSKVEGTDVTGIEEVVIP
KKKTWDKVAVLQALASTVNRDTTAVPYVFQDDPYLMPASSLESRSFLLAKKSGENVAKFI
INSYPKYFQKDIAEPHIPCLMPEYFEPQIKDISEAALKERIELRKVKASVDMFDQLLQAG
TTVSLETTNSLLDLLCYYGDQEPSTDYHFQQTGQSEALEEENDETSRRKAGHQFGVTWRA
KNNAERIFSLMPEKNEHSYCTMIRGMVKHRAYEQALNLYTELLNNRLHADVYTFNALIEA
TVCAINEKFEEKWSKILELLRHMVAQKVKPNLQTFNTILKCLRRFHVFARSPALQVLREM
KAIGIEPSLATYHHIIRLFDQPGDPLKRSSFIIYDIMNELMGKRFSPKDPDDDKFFQSAM
SICSSLRDLELAYQVHGLLKTGDNWKFIGPDQHRNFYYSKFFDLICLMEQIDVTLKWYED
LIPSAYFPHSQTMIHLLQALDVANRLEVIPKIWKDSKEYGHTFRSDLREEILMLMARDKH
PPELQVAFADCAADIKSAYESQPIRQTAQDWPATSLNCIAILFLRAGRTQEAWKMLGLFR
KHNKIPRSELLNELMDSAKVSNSPSQAIEVVELASAFSLPICEGLTQRVMSDFAINQEQK
EALSNLTALTSDSDTDSSSDSDSDTSEGK
Sequence of entity 4 (9), FASTA
>9G5B_4 Nitric oxide-associated protein 1 (chains 9)
MLPARLPFRLLSLFLRGSAPTAARHGLREPLLERRCAAASSFQHSSSLGRELPYDPVDTE
GFGEGGDMQERFLFPEYILDPEPQPTREKQLQELQQQQEEEERQRQQRREERRQQNLRAR
SREHPVVGHPDPALPPSGVNCSGCGAELHCQDAGVPGYLPREKFLRTAEADGGLARTVCQ
RCWLLSHHRRALRLQVSREQYLELVSAALRRPGPSLVLYMVDLLDLPDALLPDLPALVGP
KQLIVLGNKVDLLPQDAPGYRQRLRERLWEDCARAGLLLAPGHQGPQRPVKDEPQDGENP
NPPNWSRTVVRDVRLISAKTGYGVEELISALQRSWRYRGDVYLVGATNAGKSTLFNTLLE
SDYCTAKGSEAIDRATISPWPGTTLNLLKFPICNPTPYRMFKRHQRLKKDSTQAEEDLSE
QEQNQLNVLKKHGYVVGRVGRTFLYSEEQKDNIPFEFDADSLAFDMENDPVMGTHKSTKQ
VELTAQDVKDAHWFYDTPGITKENCILNLLTEKEVNIVLPTQSIVPRTFVLKPGMVLFLG
AIGRIDFLQGNQSAWFTVVASNILPVHITSLDRADALYQKHAGHTLLQIPMGGKERMAGF
PPLVAEDIMLKEGLGASEAVADIKFSSAGWVSVTPNFKDRLHLRGYTPEGTVLTVRPPLL
PYIVNIKGQRIKKSVAYKTKKPPSLMYNVRKKKGKINVDYKDDDDK
Sequence of entity 5 (A), FASTA
>9G5B_5 12S mitochondrial rRNA (chains A)
AAUAGGUUUGGUCCUAGCCUUUCUAUUAGCUCUUAGUAAGAUUACACAUGCAAGCAUCCC
CGUUCCAGUGAGUUCACCCUCUAAAUCACCACGAUCAAAAGGGACAAGCAUCAAGCACGC
AGCAAUGCAGCUCAAAACGCUUAGCCUAGCCACACCCCCACGGGAAACAGCAGUGAUUAA
CCUUUAGCAAUAAACGAAAGUUUAACUAAGCUAUACUAACCCCAGGGUUGGUCAAUUUCG
UGCCAGCCACCGCGGUCACACGAUUAACCCAAGUCAAUAGAAGCCGGCGUAAAGAGUGUU
UUAGAUCACCCCCUCCCCAAUAAAGCUAAAACUCACCUGAGUUGUAAAAAACUCCAGUUG
ACACAAAAUAGACUACGAAAGUGGCUUUAACAUAUCUGAACACACAAUAGCUAAGACCCA
AACUGGGAUUAGAUACCCCACUAUGCUUAGCCCUAAACCUCAACAGUUAAAUCAACAAAA
CUGCUCGCCAGAACACUACGAGCCACAGCUUAAAACUCAAAGGACCUGGCGGUGCUUCAU
AUCCCUCUAGAGGAGCCUGUUCUGUAAUCGAUAAACCCCGAUCAACCUCACCACCUCUUG
CUCAGCCUAUAUACCGCCAUCUUCAGCAAACCCUGAUGAAGGCUACAAAGUAAGCGCAAG
UACCCACGUAAAGACGUUAGGUCAAGGUGUAGCCCAUGAGGUGGCAAGAAAUGGGCUACA
UUUUCUACCCCAGAAAACUACGAUAGCCCUUAUGAAACUUAAGGGUCGAAGGUGGAUUUA
GCAGUAAACUGAGAGUAGAGUGCUUAGUUGAACAGGGCCCUGAAGCGCGUACACACCGCC
CGUCACCCUCCUCAAGUAUACUUCAAAGGACAUUUAACUAAAACCCCUACGCAUUUAUAU
AGAGGAGACAAGUCGUAACAUGGUAAGUGUACUGGAAAGUGCACUUGGACGAACC
Sequence of entity 6 (B), FASTA
>9G5B_6 28S ribosomal protein S2, mitochondrial (chains B)
MATSSAALPRILGAGARAPSRWLGFLGKATPRPARPSRRTLGSATALMIRESEDSTDFND
KILNEPLKHSDFFNVKELFSVRSLFDARVHLGHKAGCRHRFMEPYIFGSRLDHDIIDLEQ
TATHLQLALNFTAHMAYRKGIILFISRNRQFSYLIENMARDCGEYAHTRYFRGGMLTNAR
LLFGPTVRLPDLIIFLHTLNNIFEPHVAVRDAAKMNIPTVGIVDTNCNPCLITYPVPGND
DSPLAVHLYCRLFQTAITRAKEKRQQVEALYRLQGQKEPGDQGPAHPPGADMSHSL
Sequence of entity 7 (C), FASTA
>9G5B_7 28S ribosomal protein S24, mitochondrial (chains C)
MAASVCSGLLGPRVLSWSRELPCAWRALHTSPVCAKNRAARVRVSKGDKPVTYEEAHAPH
YIAHRKGWLSLHTGNLDGEDHAAERTVEDVFLRKFMWGTFPGCLADQLVLKRRGNQLEIC
AVVLRQLSPHKYYFLVGYSETLLSYFYKCPVRLHLQTVPSKVVYKYL
Sequence of entity 8 (D), FASTA
>9G5B_8 28S ribosomal protein S5, mitochondrial (chains D)
MATAVRAVGCLPVLCSGTAGHLLGRQCSLNTLPAASILAWKSVLGNGHLSSLGTRDTHPY
ASLSRALQTQCCISSPSHLMSQQYRPYSFFTKLTADELWKGALAETGAGAKKGRGKRTKK
KKRKDLNRGQIIGEGRYGFLWPGLNVPLMKNGAVQTIAQRSKEEQEKVEADMIQQREEWD
RKKKMKVKRERGWSGNSWGGISLGPPDPGPCGETYEDFDTRILEVRNVFTMTAKEGRKKS
IRVLVAVGNGKGAAGFSIGKATDRMDAFRKAKNRAVHHLHYIERYEDHTIFHDISLRFKR
THIKMKKQPKGYGLRCHRAIITICRLIGIKDMYAKVSGSINMLSLTQGLFRGLSRQETHQ
QLADKKGLHVVEIREECGPLPIVVASPRGPLRKDPEPEDEVPDVKLDWEDVKTAQGMKRS
VWSNLKRAAT
Sequence of entity 9 (E), FASTA
>9G5B_9 28S ribosomal protein S6, mitochondrial (chains E)
MPRYELALILKAMQRPETAATLKRTIEALMDRGAIVRDLENLGERALPYRISAHSQQHNR
GGYFLVDFYAPTAAVESMVEHLSRDIDVIRGNIVKHPLTQELKECEGIVPVPLAEKLYST
KKRKK
Sequence of entity 10 (F), FASTA
>9G5B_10 28S ribosomal protein S7, mitochondrial (chains F)
MAAPAVKVARGWSGLALGVRRAVLQLPGLTQVRWSRYSPEFKDPLIDKEYYRKPVEELTE
EEKYVRELKKTQLIKAAPAGKTSSVFEDPVISKFTNMMMIGGNKVLARSLMIQTLEAVKR
KQFEKYHAASAEEQATIERNPYTIFHQALKNCEPMIGLVPILKGGRFYQVPVPLPDRRRR
FLAMKWMITECRDKKHQRTLMPEKLSHKLLEAFHNQGPVIKRKHDLHKMAEANRALAHYR
WW
Sequence of entity 11 (G), FASTA
>9G5B_11 28S ribosomal protein S9, mitochondrial (chains G)
MAAPCVSYGGAVSYRLLLWGRGSLARKQGLWKTAAPELQTNVRSQILRLRHTAFVIPKKN
VPTSKRETYTEDFIKKQIEEFNIGKRHLANMMGEDPETFTQEDIDRAIAYLFPSGLFEKR
ARPVMKHPEQIFPRQRAIQWGEDGRPFHYLFYTGKQSYYSLMHDVYGMLLNLEKHQSHLQ
AKSLLPEKTVTRDVIGSRWLIKEELEEMLVEKLSDLDYMQFIRLLEKLLTSQCGAAEEEF
VQRFRRSVTLESKKQLIEPVQYDEQGMAFSKSEGKRKTAKAEAIVYKHGSGRIKVNGIDY
QLYFPITQDREQLMFPFHFVDRLGKHDVTCTVSGGGRSAQAGAIRLAMAKALCSFVTEDE
VEWMRQAGLLTTDPRVRERKKPGQEGARRKFTWKKR
Sequence of entity 12 (H), FASTA
>9G5B_12 28S ribosomal protein S10, mitochondrial (chains H)
MAARTAFGAVCRRLWQGLGNFSVNTSKGNTAKNGGLLLSTNMKWVQFSNLHVDVPKDLTK
PVVTISDEPDILYKRLSVLVKGHDKAVLDSYEYFAVLAAKELGISIKVHEPPRKIERFTL
LQSVHIYKKHRVQYEMRTLYRCLELEHLTGSTADVYLEYIQRNLPEGVAMEVTKTQLEQL
PEHIKEPIWETLSEEKEESKS
Ligands and cofactors
| ID | Name | Formula | Copies |
|---|
| GDP | Guanosine-5'-diphosphate | C10 H15 N5 O11 P2 | 1 |
| ATP | Adenosine-5'-triphosphate | C10 H16 N5 O13 P3 | 1 |
| FES | FE2/S2 (inorganic) cluster | Fe2 S2 | 2 |
| ZN | Zinc ion | Zn | 1 |
| MG | Magnesium ion | Mg | 12 |
Primary citation
Coupling of ribosome biogenesis and translation initiation in human mitochondria. Heinrichs, M., Finke, A.F., Aibara, S. et al. Nat Commun (2025) 16:3641-3641. DOI 10.1038/s41467-025-58827-x · PubMed
Other PDB entries of the same protein (UniProt P82930 (AlphaFold model), which also has an AlphaFold model), best resolution first:
- 7QI4 2.21 Å, Human mitochondrial ribosome at 2.2 A resolution (bound to partly built tRNAs and mRNA)
- 8CSS 2.36 Å, Human mitochondrial small subunit assembly intermediate (State D)
- 7P2E 2.4 Å, Human mitochondrial ribosome small subunit in complex with IF3, GMPPMP and streptomycin
- 8RRI 2.4 Å, Human mitochondrial ribosome in complex with antibiotic tigecycline
- 9OLF 2.46 Å, Membrane-associated human mitoribosome in complex with TACO1
- 9OJM 2.5 Å, Human mitochondrial 28S PIC with tRNA and mtIF2
- 8CSQ 2.54 Å, Human mitochondrial small subunit assembly intermediate (State B)
- 8CSR 2.54 Å, Human mitochondrial small subunit assembly intermediate (State C)
- 6ZM6 2.59 Å, Human mitochondrial ribosome in complex with mRNA, A/A tRNA and P/P tRNA
- 7QI5 2.63 Å, Human mitochondrial ribosome in complex with mRNA, A/A-, P/P- and E/E-tRNAs at 2.63 A…
- 9RU6 2.64 Å, Human mitoribosome bound to TACO1 (Translational activator of COX1), mRNA, A/A-, P/P-…
- 8CSP 2.66 Å, Human mitochondrial small subunit assembly intermediate (State A)
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