Dematin (DMTN) is a 405-residue protein from Sus scrofa. This is its AlphaFold structure prediction, created 1 Jun 2022. UniProt accession: F1RMC1.
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The mean pLDDT of this model is 57.8 (low overall). pLDDT is AlphaFold's per-residue confidence score from 0 to 100. In MolViewer, choose the B-factor color scheme to color the model by pLDDT, because AlphaFold stores it in the B-factor column.
| pLDDT band | Meaning | Share of residues |
|---|---|---|
| Above 90 | Very high: backbone and side chains are usually accurate | 12% |
| 70 to 90 | Confident: backbone generally right | 17% |
| 50 to 70 | Low: treat with caution | 30% |
| Below 50 | Very low: often disordered regions | 42% |
What pLDDT means and how to read it
Cell membrane, Cell projection, Cytoplasm, cytoskeleton, Cytoplasm, cytosol, Cytoplasm, perinuclear region
Compare the prediction with experimentally determined structures of the same protein:
| PDB ID | Method | Resolution | Chains and residues |
|---|---|---|---|
| 8IAI | EM | 3.5 Å | 5/6/7=1-405 |
| 8IAH | EM | 3.6 Å | 5/6/7=1-405 |
| 8IB2 | EM | 3.8 Å | 5=1-405 |
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