Unconventional myosin-VI (MYO6) is a 1266-residue protein from Sus scrofa. This is its AlphaFold structure prediction, created 1 Jun 2022. UniProt accession: F1RQI7.
Explore in 3D Color by confidence AlphaFold DB UniProt
The mean pLDDT of this model is 75.9 (confident overall). pLDDT is AlphaFold's per-residue confidence score from 0 to 100. In MolViewer, choose the B-factor color scheme to color the model by pLDDT, because AlphaFold stores it in the B-factor column.
| pLDDT band | Meaning | Share of residues |
|---|---|---|
| Above 90 | Very high: backbone and side chains are usually accurate | 26% |
| 70 to 90 | Confident: backbone generally right | 43% |
| 50 to 70 | Low: treat with caution | 19% |
| Below 50 | Very low: often disordered regions | 12% |
What pLDDT means and how to read it
Cell projection, filopodium, Cell projection, microvillus, Cell projection, ruffle membrane, Cytoplasm, cytosol, Cytoplasm, perinuclear region, Cytoplasmic vesicle, clathrin-coated vesicle, Golgi apparatus, trans-Golgi network membrane, Membrane, clathrin-coated pit, Nucleus
Compare the prediction with experimentally determined structures of the same protein:
| PDB ID | Method | Resolution | Chains and residues |
|---|---|---|---|
| 4PFO | X-ray | 1.75 Å | A=2-789 |
| 4PJN | X-ray | 2.0 Å | A=2-789 |
| 4PJM | X-ray | 2.05 Å | A=2-789 |
| 4PJL | X-ray | 2.1 Å | A=2-789 |
| 4E7S | X-ray | 2.25 Å | A/B=2-789 |
| 4E7Z | X-ray | 2.3 Å | A/B=2-789 |
| 4PFP | X-ray | 2.32 Å | A/C=2-789 |
| 4PJJ | X-ray | 2.4 Å | A=2-815 |
| 4PK4 | X-ray | 2.78 Å | A=2-789 |
MolViewer loads the AlphaFold model straight from AlphaFold DB into your browser. Show it as a cartoon, color by pLDDT, measure distances and angles, and load a PDB structure next to it to compare.