Ribosome production factor 2 homolog (HT_0061110) is a 350-residue protein from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719). This is its AlphaFold structure prediction, created 1 Aug 2025. UniProt accession: G0SF80.
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The mean pLDDT of this model is 84.5 (confident overall). pLDDT is AlphaFold's per-residue confidence score from 0 to 100. In MolViewer, choose the B-factor color scheme to color the model by pLDDT, because AlphaFold stores it in the B-factor column.
| pLDDT band | Meaning | Share of residues |
|---|---|---|
| Above 90 | Very high: backbone and side chains are usually accurate | 64% |
| 70 to 90 | Confident: backbone generally right | 16% |
| 50 to 70 | Low: treat with caution | 7% |
| Below 50 | Very low: often disordered regions | 13% |
What pLDDT means and how to read it
Involved in ribosomal large subunit assembly
Component of a hexameric 5S RNP precursor complex, composed of 5S RNA, RRS1, RPF2, RPL5, RPL11 and SYO1; this complex acts as a precursor for ribosome assembly
Nucleus, nucleolus
Compare the prediction with experimentally determined structures of the same protein:
| PDB ID | Method | Resolution | Chains and residues |
|---|---|---|---|
| 8PV7 | EM | 2.12 Å | Cf=1-350 |
| 8PVL | EM | 2.19 Å | Cf=1-350 |
| 8PVK | EM | 2.55 Å | Cf=1-350 |
| 8PV1 | EM | 2.56 Å | Cf=1-350 |
| 8PV2 | EM | 2.63 Å | Cf=1-350 |
| 8PV3 | EM | 2.8 Å | Cf=1-350 |
| 8PV5 | EM | 2.86 Å | Cf=1-350 |
| 8PV4 | EM | 2.9 Å | Cf=1-350 |
| 8I9R | EM | 3.1 Å | Cy=1-350 |
| 7OZS | EM | 3.5 Å | C=1-350 |
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