Anti-human Langerin 2G3 lambda chain is a 234-residue protein from Mus musculus. This is its AlphaFold structure prediction, created 1 Jun 2022. UniProt accession: G0YP42.
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The mean pLDDT of this model is 89.8 (confident overall). pLDDT is AlphaFold's per-residue confidence score from 0 to 100. In MolViewer, choose the B-factor color scheme to color the model by pLDDT, because AlphaFold stores it in the B-factor column.
| pLDDT band | Meaning | Share of residues |
|---|---|---|
| Above 90 | Very high: backbone and side chains are usually accurate | 78% |
| 70 to 90 | Confident: backbone generally right | 13% |
| 50 to 70 | Low: treat with caution | 2% |
| Below 50 | Very low: often disordered regions | 7% |
What pLDDT means and how to read it
Compare the prediction with experimentally determined structures of the same protein:
| PDB ID | Method | Resolution | Chains and residues |
|---|---|---|---|
| 1NGP | X-ray | 2.4 Å | L=20-234 |
| 1NGQ | X-ray | 2.4 Å | L=20-234 |
| 1PG7 | X-ray | 2.5 Å | W/Y=20-229 |
| 1ETZ | X-ray | 2.6 Å | A/L=21-234 |
| 6MW9 | EM | 7.3 Å | D/H/L/P=20-233 |
| 6MWV | EM | 7.3 Å | D/H/L/P=20-233 |
| 6MWC | EM | 7.5 Å | D/H/L/P=20-233 |
| 6MUI | EM | 7.7 Å | D/H/L/P=20-233 |
| 6MWX | EM | 8.2 Å | D/H/L/P=20-233 |
| 8EMA | EM | 8.2 Å | L/R=1-234 |
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